| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0870 |
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| Symbol | |
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| ID | 5105229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 802396 |
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| End bp | 803199 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506774 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001190967 |
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| Protein GI | 146303651 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.329831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCC TAACCAAGTT ATATGCCTAC ATCTACCTGA GAGGATTTAG GATCTGGAGC
AGTTACAAGA CTCAGATGGT TCTAAATGTT CTATCGTGGG TTTTACCCGT TTTCACCTAC
TACTTTGTGG GCACTTCTTT GGGCGGAGAC CTCGAGAACT TCACAGGTGT TACCAACTAC
ACGGCATTCG TGGTGATTGG GCTAGCGTTT CAAGGTTACG TGTCCTCTAC AATAACCACC
ATAAGTCAGA GACTTAGAAA CGAACAGCTT TACGGCACCA TAGAGTACTA CGTGCTATCA
GAGGGTGGAG TTCTCTCCTT TCTTGTTTAC TCCGCGTTGT GGGGTTTCAC AATAAATTCC
GTTAATGCGG GAGTCATCCT GGGGATTGGG GAGATGCTAC ATGTTCACTT CGAGATTAAT
CCAGTATCAA CCTTGGTAGT TTTCGCCCTA CTCCTGTCAT CTGCCCTGGG GCTCTCAATG
ATTTCTGCAG GTTTCACCAT GTTGGTGAAG CAGGGAAACC CAATCTCCTT CTTCTTCTCT
ACCTTTACCA CGCTGATGTC GGGGACGGTT TTTCCAGTCA CGGTATTGCC AAGCTGGATA
AAGGAGATTA GCCTAGCCAT ACCCCTAACC TGGGCCCTAA ACGGTCTCAG ACTCACAATG
TTAGACGGTT ACGGAATAGG CGGAGTGGGG GAGATCGTGT TAGTTCTCGT GCTCTTCAAC
GCAGTTCTCT TACCGCTGGG TGGATGGTTC TACCTTTACT CCTTTAACAG GTCCAGGAGA
AAGGGAACCT TGAGCGAGTA TTAA
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| Protein sequence | MGILTKLYAY IYLRGFRIWS SYKTQMVLNV LSWVLPVFTY YFVGTSLGGD LENFTGVTNY
TAFVVIGLAF QGYVSSTITT ISQRLRNEQL YGTIEYYVLS EGGVLSFLVY SALWGFTINS
VNAGVILGIG EMLHVHFEIN PVSTLVVFAL LLSSALGLSM ISAGFTMLVK QGNPISFFFS
TFTTLMSGTV FPVTVLPSWI KEISLAIPLT WALNGLRLTM LDGYGIGGVG EIVLVLVLFN
AVLLPLGGWF YLYSFNRSRR KGTLSEY
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