Gene Msed_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0855 
Symbol 
ID5104266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp788913 
End bp789458 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID640506759 
Productmethyltransferase type 11 
Protein accessionYP_001190952 
Protein GI146303636 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.233642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGTCGC TGTTTGACAG CATTAATTCC TGGGAGTTCA AGCCGTATAG GAGGATGGGT 
GTTACCATAG ATGAGGAGAT GTTTTACGCC AAGATTCTCG CAAGGTTTGT GGAGGGCCTG
AGTCCCAGGA AAGTCTTGGA TGTGGGTTGC GGGAACTGTC TTTTCAGTCT CGTCCTCAAG
AAGAGGTTCC CTCATCTCGA GATCACGTCT CTTGACCTAT GGAACGATGA GATTTCGGTG
ACTGAGATCA GGGGCTATCT TAGGGACGTT GACACCAACC TAGTTCAGAA CCTCTTTCCT
CTGCCCTTTA GGGACGACCA ATTTGACCTG GTATACGCTC CGCTTTACTT CTACAATGTG
GTAAAGAGTA GAAGGGATGA ACTTGCCATG GAAATCTTTA GGGTATTGGG CAAAAACTCC
TTCCTAATAC TCGTGGACTT AGAAATCGTA AGAAACCTCA GGAAGAGCTT TCTGAAGGCA
GGGTTCGTCG AGAGGAACTA TTACGCAAAC CAGGGAGTAT TCTTCTCGTT GATGCAAAAG
ACTTGA
 
Protein sequence
MSSLFDSINS WEFKPYRRMG VTIDEEMFYA KILARFVEGL SPRKVLDVGC GNCLFSLVLK 
KRFPHLEITS LDLWNDEISV TEIRGYLRDV DTNLVQNLFP LPFRDDQFDL VYAPLYFYNV
VKSRRDELAM EIFRVLGKNS FLILVDLEIV RNLRKSFLKA GFVERNYYAN QGVFFSLMQK
T