| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0847 |
|---|
| Symbol | |
|---|
| ID | 5105207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 778735 |
|---|
| End bp | 779643 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640506752 |
|---|
| Product | cobalt transport protein |
|---|
| Protein accession | YP_001190945 |
|---|
| Protein GI | 146303629 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATCAA TAGTGGAGCA AGTGGTTAGC TGGGGACTCG TCATCTTCGG AACCTTCACT
CCAATCTATT TCCTGTTCAA GGTTTTGGGT TTCTCCGGAT TTCAAGGACT TACCTCGTAC
ATCCCCGGTA ACACTCCACT TCACAGGCTT AGCCCCATGA CGAAGCTAGT CATCCTGGTG
GGGATAACCT TGACTGCCTC TTCGTCGATC TGTTGGGTTG GTGCCCTGGA GGGGCTAGCA
TTACTGCCCC TCTTCTACCC CCTGAAACTA GTCAGGAAAG TCGCGGGGTT CAGCTTCACT
CAAGTCGTGG GTATGGCCTG GGGTTTCGCG GTCTTCACTT CACCGTCTGT GCTATCGCTC
ATTTTCCATT CCTATAACGT GGTGTGGGTG TTTCCAAGTT ATTTTCAGTA CCTTGGATAC
GTCCCAGAGT TAAGCGTCCA GGCCCTTGAG TACGGATTTC AGACAGCCAT GAGGGTTTGG
GCCATGCTCC TCGCGTCATC GCTTCTCCTG GTTACTACAA CTCCCACAGA CGTGATGAGA
ACTCTTGAAA GGTTAGGACT CCCAGAGTCG CTCACGCTCT CGATCATGGT AGGGATGGCC
TTCGTTCCAA GGGTGTTCTC GACGATGGAT GAGTCCTACA GGCTACAACA GCTGAGGGGA
GAAGGTATCC TGAACGGCGT GAAGACAGTG TACAGATCCG TGATCCCGGT GGCCATCTTC
CTGTTCAGGA GGGCTAGGAT AACAGGATTA TCACTTGAGA CGAGGGCTTT CGGAAAGAGA
AGGAGAAGAC TAGGTGAAGT GAAGATTTCG CGTTTCGACC TAGAGGTCAT GATCGCAGTT
TTTTCATTTA CGATGATTGA CTTAGTACTC GTGGCAATTG GAGTGATACC AGCGATACCA
TTTAGGTAA
|
|---|
| Protein sequence | MISIVEQVVS WGLVIFGTFT PIYFLFKVLG FSGFQGLTSY IPGNTPLHRL SPMTKLVILV
GITLTASSSI CWVGALEGLA LLPLFYPLKL VRKVAGFSFT QVVGMAWGFA VFTSPSVLSL
IFHSYNVVWV FPSYFQYLGY VPELSVQALE YGFQTAMRVW AMLLASSLLL VTTTPTDVMR
TLERLGLPES LTLSIMVGMA FVPRVFSTMD ESYRLQQLRG EGILNGVKTV YRSVIPVAIF
LFRRARITGL SLETRAFGKR RRRLGEVKIS RFDLEVMIAV FSFTMIDLVL VAIGVIPAIP
FR
|
|---|
| |