| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0822 |
|---|
| Symbol | |
|---|
| ID | 5105145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 753103 |
|---|
| End bp | 753981 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640506727 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_001190921 |
|---|
| Protein GI | 146303605 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTAC AATTCAGAGG TCAAGTAATT AGTACGGAGA GAGAAGATGG AAGTTCCTTC
ATGGCTCCAG ATGTTCTAGT TTTCAGGTAT CCTAGGGAGC AGGTTACTTC AAAGTCTATT
TTCATTGTTC AACCTACGGA GAACTGCGTC GTAATTATTC AGGGACAGGT GCAGGCGGTA
CTCCCTTCTG GTACGCACAA TATACAATCT CCTCAGAACC CACTATCCTC GTTTATGGCT
AAGTTCAGGT ATAACCAGCT ACCGTTTGAT ACGATTGCGC TGTTCATATC AATGACAAGG
CATGAGGTCA GAATCCAAGG CAAGAGTCAG ACAGACGATT TAGTCCCGTT GGATTATGAA
GTTGCAGTGT ATTACAGAGT AACTGACGCT GCTAAATTGA CAGTGAACGT TCAATTTGCA
GGTGCTTTCT TCAAGGACGG AGACTTGGCA GCATACCTAG CGCCTATTAT TGATCAAGAG
GTTAGTTCGA TTCTGAACCA GGTTAAACTG GTAGACGTTT ACAAGAAGTT TGGGGACATC
TCCATGGCTG TCACTGCAGC CCTGAAGCAA TTCTTGGCAG AACTTGGAGT AGAGCTGATT
TCAGTTAGGG TAACAAGACT AATCCCAGAG GACCCTGAAC TCAGGAGAAT AATTCAGCTA
AGGGACTTAG GCCTAGAAGT TGAGATGGCC GTGAGAATGG GATTAGCGAG GATACTTACT
GAGCAGGGCA ATCCAGCTAG CGTGAACATG GCCATAGGGA CTCCCTACTA TCCAAACCTC
TCCACACTTG TCAACTTGCC CCAGAGGCTC TTCCAGGTCT CCATGGGGTC TGGGAAGGAG
GGTGAGAGTG ACGAGCAAAA TAAACCCAAG AGCTCTTAG
|
|---|
| Protein sequence | MSLQFRGQVI STEREDGSSF MAPDVLVFRY PREQVTSKSI FIVQPTENCV VIIQGQVQAV
LPSGTHNIQS PQNPLSSFMA KFRYNQLPFD TIALFISMTR HEVRIQGKSQ TDDLVPLDYE
VAVYYRVTDA AKLTVNVQFA GAFFKDGDLA AYLAPIIDQE VSSILNQVKL VDVYKKFGDI
SMAVTAALKQ FLAELGVELI SVRVTRLIPE DPELRRIIQL RDLGLEVEMA VRMGLARILT
EQGNPASVNM AIGTPYYPNL STLVNLPQRL FQVSMGSGKE GESDEQNKPK SS
|
|---|
| |