| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0808 |
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| Symbol | |
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| ID | 5105131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 738036 |
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| End bp | 739040 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506713 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001190907 |
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| Protein GI | 146303591 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.168839 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATGGA GATCCGTCCT CCTAGATATC CTTGAGTACA TGGTCGCGCC TTATTCGGTC
CTCAGGAAAA TTCTTCCCCA AGTCATAATG TTAGCTCTAG TCGTACTTTC CAATGCTGTG
ATATTCGTGA CTTATCAACA CCTGGACTGG ATCTCTGCGA TTTACGCTGG AGTAAACGTT
GTTACCACGG TGGGACTTTA CGCACCCAAC ATTAATCAAA TGCCGTCCAT CGAGAAACTT
CTACTGGTCG TGACTATAAT CATGGCAGTA GGCCTTTATA CTAGCATTAT CCAATCTATG
GTGAACACGG TAGTTAGAAG GTCTTCGTGG GCAGATGCCA GGGCAAGATG GAGGGGATCT
CACTTGAAGG ATCACATCGT TCTCATAGGA ACTGGAAGGG TGATAGTGAG CGCGGCCAGA
AGGTTGGAAA GACTTGGAAA GGAGTATATA GTACTCACTA GCTCCAAGGA AGTCTTGGAA
CAATTGAAGG GAGACAGGGT AATCCTTGGA AACCCCGAGG ACGAGAAGGA TCTCATGAGC
GCCGGAATTC CTTCAGCCTC CTCCGCTGTC ATTGCCATGG AGGACGATAC CAAGACACTT
CTTGTTACCC TAAAGGTTCA GAAAATTAAC CCTCCCCTCA ATACTATCTG TGTAGTGAAG
CAGGACTCTC TCATAGACGT GTTCAGGACT GCTGGAGCGG ACGAGGTTAT CCCCTACGAG
GACATTATCG GGAGGATAAC TGCAGCTGCC TCTATTGCCA GGAATGTCGG TGGAGTCATC
TTCACCATGG ACAGGAAGGC AGATATGGTG GTAGGGTTCT TTGACATTAA AAAAGAGGTT
AAGATTTCGT CCCTTCCCAG CGATGTCGTG CCCATCATTA TTGTGGACAG TGGGAAGCTT
AACCCCTACT TTTCCAAGGA TACAGTGTTG AAGCCTGGAC AAACGCTGAT CCTACTGGGC
AATCCAGATA AGTTCAAGGA AATAACTCAA ATGGTTTCAC AATAG
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| Protein sequence | MTWRSVLLDI LEYMVAPYSV LRKILPQVIM LALVVLSNAV IFVTYQHLDW ISAIYAGVNV
VTTVGLYAPN INQMPSIEKL LLVVTIIMAV GLYTSIIQSM VNTVVRRSSW ADARARWRGS
HLKDHIVLIG TGRVIVSAAR RLERLGKEYI VLTSSKEVLE QLKGDRVILG NPEDEKDLMS
AGIPSASSAV IAMEDDTKTL LVTLKVQKIN PPLNTICVVK QDSLIDVFRT AGADEVIPYE
DIIGRITAAA SIARNVGGVI FTMDRKADMV VGFFDIKKEV KISSLPSDVV PIIIVDSGKL
NPYFSKDTVL KPGQTLILLG NPDKFKEITQ MVSQ
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