Gene Msed_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0780 
Symbol 
ID5103469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp711872 
End bp712273 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content45% 
IMG OID640506685 
Productrhodanese domain-containing protein 
Protein accessionYP_001190879 
Protein GI146303563 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.112392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAA TAGAGCAGTA CTCAACCCCG TTCTATAAGA ACATAATTGA TATGCCTCCC 
TCAATGGTTA GAAAGCTGTG GAAAAGGAGC AACATACTAG TGCTGGATAT AAGGACGCCA
CAGGAGTATG TGGAGCACCA CATTCCAGGA TCCCTGCTCA TTCCCATGGA TTACCTCGAA
GTCCTGCAGG AGTACTTTAG TGATAAGGAA GTTGCAGTGA TATGCGAACA CGGGAACAGG
GCTAGATACG CTACTTACGG GATGCCACAT CTCTATAAGA AGAAGGCAAT TTACATGATA
GGCGGTATTG TGGGGTGGAT GTCAATGGGT TATGAAGTAG TGAGCGGTAT GGATGAAAAC
GGGACTAAAT GGGAACAATG GTTGGACGAA AAGTTAAAGT GA
 
Protein sequence
MQIIEQYSTP FYKNIIDMPP SMVRKLWKRS NILVLDIRTP QEYVEHHIPG SLLIPMDYLE 
VLQEYFSDKE VAVICEHGNR ARYATYGMPH LYKKKAIYMI GGIVGWMSMG YEVVSGMDEN
GTKWEQWLDE KLK