| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0752 |
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| Symbol | |
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| ID | 5104263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 684829 |
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| End bp | 685527 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640506657 |
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| Product | small-conductance mechanosensitive channel-like protein |
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| Protein accession | YP_001190851 |
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| Protein GI | 146303535 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0265282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGAGG AAAACATTAC ATCCGTGAAT GAAATAAGGA AGAAGATCGC CGAGAGCACG
GGGAAACTGG TTCTCTATAT CATACTTTTT GTGATTGTGG AAGCTATAGT AAACAACATT
CTTTTTCCAT TCCTGGAGTC TATAAAACTT CAGTTGCCCT ACATTACTGT CTCAAACCAG
TCTATTTCCA GCTATCAGCC CTACGTTAAC ATTTTGTTAT CGCTAGCTTT TGGATACTTA
ATTATCCAGG GATTTATATC AGTTGTTTAC TGGAATTTGA GACTAAAGTA CGACCATTCC
ACCTCGGCAT CTATGCGAAG CGTTTTCAGA CTTGTGGGAA TTGGTGCGCT TGTGGCTGCA
ATAGCTGGGG CGGTCGCTGG TGGAGCCAGC GGTGTAGCGC TGGGCGGATT CATAGGAATA
GTTGTGGGCT TTGCATCCCA ACAGGTTTTG GGACAAGCGG TAGCAGGACT GTTCCTCCTT
TTGTCGAGGC CCTTCAAAAT AAAGGATCAT ATCAGCGTAA CAGGAGATGA AGGAGTTGTG
GAGGAGATCA CAACTCTTTT CACTTATATA ACAAAGAACG ACAATACAAT TGCGATCATT
CCCAATAACG TAGTTTTCGG AAACAAGGTA TATCTGTATC CAAAACAAAC CCCTTCTCAA
CCCCAGTCTG GACAAGGAAG TACGCAACAA AGTAAATGA
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| Protein sequence | MKEENITSVN EIRKKIAEST GKLVLYIILF VIVEAIVNNI LFPFLESIKL QLPYITVSNQ
SISSYQPYVN ILLSLAFGYL IIQGFISVVY WNLRLKYDHS TSASMRSVFR LVGIGALVAA
IAGAVAGGAS GVALGGFIGI VVGFASQQVL GQAVAGLFLL LSRPFKIKDH ISVTGDEGVV
EEITTLFTYI TKNDNTIAII PNNVVFGNKV YLYPKQTPSQ PQSGQGSTQQ SK
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