| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0749 |
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| Symbol | |
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| ID | 5103438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 681823 |
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| End bp | 682839 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506653 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001190848 |
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| Protein GI | 146303532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
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| TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0557014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0243779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCTCCC TATACATCCC GCCAGGTAGA CCTGTAGCTG ATGTAGTTAA CATGTTGAGG
CAAGAGGCAT CAATCTCACA AAACATCAAG TTAAAGAGGA CAAGGGATGC CGTGGAATCT
GCGATAACAA CCGCAATAGA TAGGCTCGTG AGCATTAACA AGATCCCCGA AAATGGTTTA
GTGCTTTTCT GCGGGGAGAA CTTCGACACA GGGGGGTTCA AGTGCTACAT GTTCTCTCCT
CCAGAGAAGG TCACAGTCTA CTTCTACCGA ACAGACAAGC AGTTCCACAC GGAGTTCCTC
GAGGATATGG TAGAAGTATC GGAGGTATAC GGCCTACTGA TCGTGGAGAG GGATCAGGGA
ACCATAGGAG TCTTAAGGGG TTCAAGGATT GAGGTTCTAG AGGAGATGGA AGGTTATGTT
CCAGGAAAAC ATATGATGGG TGGACAAAGC CAAAGAAGAA TTGACAGGAT TATTGAGGAG
CTCTATCATG ATTTCTTGAA GAGCTTTGGC GAAAAGGTAA ACAACTATCT CCTGCCCTAT
CTCGAAAGCG GTAAATTAAA GGGAATTCTC CTGGGAGGTC CAGGATACGC GAAGAAGGAC
TTCTACGACT CTGACTACAT TGACTACAGA TTGAAGAAAC TGATCTTGCT CCCCTTGATC
GATATCGGAT ACCAAGGAGA GGCAGGGCTT AGGGAAATGG TAATGAAGTC TAAGGACGTT
CTTAAGAACC AGAAATACAT AGAGGTGGAG GACCTAATAG AGGAATTGAA GTATCATCTA
GCCAAGGATG ATGGGCTAGT GGTTTATGGG AAGGAGGAAA TAAACAAGGC CTTGCAGATG
GGTGCCATAG ACAAGTTAAT TATATTTGAT GACGGGACCG AGGAGAACGA GAAAATGGTT
CAGGAAGCCG AGAAGTACGG AACTAAGGTT TACCTAGTAG GAGATGAGAT ACCTGAGGCT
GAGTGGGTAA GGAAAACCTT CAGTGGCATG GTGGGGAAGC TTAGGTTTAG GATCTGA
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| Protein sequence | MLSLYIPPGR PVADVVNMLR QEASISQNIK LKRTRDAVES AITTAIDRLV SINKIPENGL
VLFCGENFDT GGFKCYMFSP PEKVTVYFYR TDKQFHTEFL EDMVEVSEVY GLLIVERDQG
TIGVLRGSRI EVLEEMEGYV PGKHMMGGQS QRRIDRIIEE LYHDFLKSFG EKVNNYLLPY
LESGKLKGIL LGGPGYAKKD FYDSDYIDYR LKKLILLPLI DIGYQGEAGL REMVMKSKDV
LKNQKYIEVE DLIEELKYHL AKDDGLVVYG KEEINKALQM GAIDKLIIFD DGTEENEKMV
QEAEKYGTKV YLVGDEIPEA EWVRKTFSGM VGKLRFRI
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