| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0732 |
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| Symbol | |
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| ID | 5103770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 669065 |
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| End bp | 669742 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506636 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001190831 |
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| Protein GI | 146303515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.447579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTCTG ATATGACAGC GATTTTCGTG GATATGGGAG ATACCCTGGT CAAGTTCGTT
CCCAGGATGC ACGAGAGCAT TGCCAAGGCA ATGGCAGAGG AGGGATTAGA GGTTAACGAA
AGGGAGGTTT ACAGGGCTCT CATGAAGCAC ATGGGGAAGG CAAACTTTCC GCATCCGGAT
CATGATGGAC TCTCGCAACT CGATTTTTAT GATATACTAT ATGAGATGGG AAAACCAGCA
GATCCTCAGG TAGTGAAGAG GCTGTCGTCG AGAAACTATC TTTCAGAACA CTTTGAGCTC
TACGAGGATG CCTTACCCTT CTTGAGGGAG GTTAAGGCCA TGGGATTTAA GGTGATCCTC
GTTACCAATA CCACGAGGAA AGTTCATACC ATACTGAAAA CCCTAGATCT TTACAGGTAC
CTAGACGGAG TTATAGCATC CTGTGATGTG GGTGTGATGA AACCCAATCC CAAGATATTC
TATCACGCCA TTAAGGAGGC TGGGGAGGAA GGGATACACA TAGGCGACGT GTATGAGATC
GACTACGTGG GTGCAAGGAG AGCTTACCTG AACGCTATCC TCGTGGACAG GTTTGGATTT
TACCCGGAGG TAAAGGAGAA CAAGGTGAGC GATCTATATC AGGCTCTAGA GTTAATAAAA
GAAAAATTGA AATTTTGA
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| Protein sequence | MRSDMTAIFV DMGDTLVKFV PRMHESIAKA MAEEGLEVNE REVYRALMKH MGKANFPHPD
HDGLSQLDFY DILYEMGKPA DPQVVKRLSS RNYLSEHFEL YEDALPFLRE VKAMGFKVIL
VTNTTRKVHT ILKTLDLYRY LDGVIASCDV GVMKPNPKIF YHAIKEAGEE GIHIGDVYEI
DYVGARRAYL NAILVDRFGF YPEVKENKVS DLYQALELIK EKLKF
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