| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0709 |
|---|
| Symbol | |
|---|
| ID | 5103747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 647866 |
|---|
| End bp | 648939 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640506613 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001190808 |
|---|
| Protein GI | 146303492 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00978] aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.954197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGAA CGCTAAAGGC CGCAATTCTC GGGGCCACAG GTCTGGTTGG AATAGAATAC
GTGAGAATGT TAGCTGATCA TCCCTACATC AAGCCAACAT ATCTTGCAGG AAAGGGTTCC
GTGGGAAAGC CCTATGGCGA AATAGTTAGA TGGCAAACAG TTGGGAACGT GCCCAAAGAG
GTAGCCAACC AAGAGGTAAA ACCAACGGAT CCGAAGCTAA TGGATGACGT TGACATAATT
TTCTCTCCGC TACCGCAGGG CGCAGCGGGA CCTGTCGAGG AGCAGTTCGC AAAGCTAGGC
TTCAACGTGA TCAGCAATTC TCCGGATCAC AGGTTTGATA TGGACGTTCC CATGATAATA
CCGGAGGTCA ATCCGCATAC CGTGACCTTA ATTGACGAGC AAAGGAAGAG GAGGGACTGG
AAGGGATTCA TAGTTACCAC TCCCTTATGC ACGGCCCAGG GAGCTGCAAT ACCCCTAACG
CCCATTTATC AGAACTTCAA GATGAGCGGT GTAATGATAA CCACAATGCA ATCCTTGTCA
GGTGCTGGCT ATCCGGGAAT CGCTTCCCTG GATATTGTGG ACAACGCTCT CCCCCTGGGA
GATGGGTACG ACGCCAAGAC CGTGAAGGAG ATAACAAGAA TACTATCAGA GGTTAAGAGG
AACGTTCAGG AGCCCGGCGT CAACGAGATA ACCCTGGATG CTACTACCCA TAGAATTGCA
ACAATTCACG GTCACTACGA GGTAGCATAC GTAACCTTCA AGGAGGACAC AGACGTTAGA
AAGGTAATGG AGTCGATGGA GTCCTTCAAG GGAGAACCCC AGGACCTGAA GTTACCAACA
GCACCAGAGA AGCCAATCAT AGTTACGACA CAGGACGCTA GACCACAGGT ATTCTTCGAT
AGGTGGGCTG GAAATCCGCC CGGAATGAGC GTTGTTGTGG GAAGGCTAAA GCAGGTTAAC
CCAAGGACCA TAAGGTTCGT TTCGCTAATC CATAACACAG TTAGGGGAGC AGCTGGAGGC
GGTGTGCTGA CAGCTGAGCT CTTAGTGGAG AAGGGCTACA TAGACAAGAG ATGA
|
|---|
| Protein sequence | MRRTLKAAIL GATGLVGIEY VRMLADHPYI KPTYLAGKGS VGKPYGEIVR WQTVGNVPKE
VANQEVKPTD PKLMDDVDII FSPLPQGAAG PVEEQFAKLG FNVISNSPDH RFDMDVPMII
PEVNPHTVTL IDEQRKRRDW KGFIVTTPLC TAQGAAIPLT PIYQNFKMSG VMITTMQSLS
GAGYPGIASL DIVDNALPLG DGYDAKTVKE ITRILSEVKR NVQEPGVNEI TLDATTHRIA
TIHGHYEVAY VTFKEDTDVR KVMESMESFK GEPQDLKLPT APEKPIIVTT QDARPQVFFD
RWAGNPPGMS VVVGRLKQVN PRTIRFVSLI HNTVRGAAGG GVLTAELLVE KGYIDKR
|
|---|
| |