| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0658 |
|---|
| Symbol | |
|---|
| ID | 5103818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 603447 |
|---|
| End bp | 603869 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640506562 |
|---|
| Product | translation initiation factor IF-2 subunit beta |
|---|
| Protein accession | YP_001190757 |
|---|
| Protein GI | 146303441 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain |
|---|
| TIGRFAM ID | [TIGR00311] translation initiation factor aIF-2, beta subunit, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000021043 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00876921 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGA GAGATAAACT CTATCACGTG CTACTGGACA GGCTTTATGC GAAGTTGCCC
AAAAAGGACC TAGCGTCAGA GACCCAAACT CTTCCCACAC TTTCCATCAT CAACGTTGGA
AACACTACTA TCATAAGGAA CTTCAGTGAG TACTGCGATA GAATTAGAAG AGAAGACAAG
ATCTGCATGA GATACCTGCT GAAGGAACTA GCTGCTGCGG GATCCATTTC TGAAAACGGA
CAGTTGATGA TTCAAGGTAA GTTCTCAAAT GCCATAGTTA ATACCTTCAT GGACAGGTTC
CTAAAGACCT ACGTTCAATG TTCCACGTGC AAGAGCCTAG ACACCGTCCT TGTCAAAGAC
AAGAAAATAT GGTATATTCA ATGCCTAGCC TGCGGTGCCA AAAACCCCGT AAAGCCACTG
TGA
|
|---|
| Protein sequence | MSERDKLYHV LLDRLYAKLP KKDLASETQT LPTLSIINVG NTTIIRNFSE YCDRIRREDK
ICMRYLLKEL AAAGSISENG QLMIQGKFSN AIVNTFMDRF LKTYVQCSTC KSLDTVLVKD
KKIWYIQCLA CGAKNPVKPL
|
|---|
| |