| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0657 |
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| Symbol | |
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| ID | 5103817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 602135 |
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| End bp | 603391 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506561 |
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| Product | RNA modification protein |
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| Protein accession | YP_001190756 |
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| Protein GI | 146303440 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000290967 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.02979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTT ACTTTGAGAC GTACGGATGT GCCCTAAATA AGGGTGATAC TTACTCAATG
ATGACATTAC TCAAGGGCAG AAACCACGAG ATAGTGAATA GTGAAGAGCA GGCTGACGTT
CTCGTCATAA ACACGTGTGC CGTGAGGATG GAAACAGAGG AGAAGATGAA GAAGAGAATC
TTAGAACTCT CAAAGACTGG GAAGAAACTG GTAGTTGCAG GCTGTTTGGC CGGGGCGGAG
CCAGGTCTAG TCATGTCATT GGCCCCCCAA TCTTCGCTAA TAGGCCCCCA ATCCATAGGG
GATGTAGTTA AGGCAGTGGA ATCTCGGGAG AGGATCGTGA GCCTTCATGG GGAACTTCCC
TCCGTCTTAC CTAGTGTCTT TGAGGGGCTG ATCTCAGTTA TCCCCATCGC AGATGGATGT
GCAGGTAGTT GCAATTTCTG TATCACGAAA TTAGCTAGGA AGGAGCTTAG AAGTTATCCT
CCCAGGATGA TCGTGGAAAC GGCGAGAAAG GCTATCGAGA AAGGTGCTAA GGAAATAGAG
CTAACGGGAC AGGATACGGC TGCCTACGGT TTGGACCTAG GAAGAGATAT AAGACTCGCA
GATCTTGTTG GGGAGGTCTC TTCCCTAGAA GGGGACTTTA TGGTGAGGGT AGGAATGATG
ACCCCAGAAC TTGCCATGAG ACAGTTAGAC GATCTGTTGG ATGCTTGGGA CAATCCTAAG
GTGTACAAGT TCTTCCATCT GCCTGTGCAG AGCGGTAATG ACCAGGTGTT AAGGGCGATG
AACAGGAAGT ATACACTGGA TGAGTTCAGG GAAATTGTTA GGGAAATAAG GAAGAGGTTT
CCCTTGGTAA ACATAACCAC TGACATTATA GTGGGTCATC CCGGAGAGGA TGAAAATGCC
TTTGAGGACA CCTTAAACCT CATGAAGGAA TTAAGGTTTG AGAGGATACA TATAGCTATG
TACTCGCTAA GGCCTAATAC GAGAAGTGCC ATGATGACCC AGGTTCCAGG CCCAATTAAG
AAGGAGAGAC TTAAGAGGGC TGTAACTCTT TATGAGGAGC TCTCAAGGGA GATTCACAGG
GAGTACGTGG GAAGGAAAAT GAAGGTCCTA GTTCTGGAGA ACGGAAAGGA CAACACAAAG
ATAGGCAGAA CGCTAAACTA CATCCCAGTT ATAGTTAAGG ACGCAGACCT TGGGAAGTGG
TATGAGGCGG AGATTACGGA TTCATCATTC TTTGACTTGA GAGGATCAAT TGTTTAA
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| Protein sequence | MRIYFETYGC ALNKGDTYSM MTLLKGRNHE IVNSEEQADV LVINTCAVRM ETEEKMKKRI
LELSKTGKKL VVAGCLAGAE PGLVMSLAPQ SSLIGPQSIG DVVKAVESRE RIVSLHGELP
SVLPSVFEGL ISVIPIADGC AGSCNFCITK LARKELRSYP PRMIVETARK AIEKGAKEIE
LTGQDTAAYG LDLGRDIRLA DLVGEVSSLE GDFMVRVGMM TPELAMRQLD DLLDAWDNPK
VYKFFHLPVQ SGNDQVLRAM NRKYTLDEFR EIVREIRKRF PLVNITTDII VGHPGEDENA
FEDTLNLMKE LRFERIHIAM YSLRPNTRSA MMTQVPGPIK KERLKRAVTL YEELSREIHR
EYVGRKMKVL VLENGKDNTK IGRTLNYIPV IVKDADLGKW YEAEITDSSF FDLRGSIV
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