| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0646 |
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| Symbol | |
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| ID | 5103806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 591207 |
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| End bp | 592544 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506550 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001190745 |
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| Protein GI | 146303429 |
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| COG category | [H] Coenzyme transport and metabolism
[S] Function unknown |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG1992] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0762615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.306983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAGC CCGTAGTTAT GGCCATTGGC GGATTTGACA GTGGAGGAGG GGCGGGGGTA
GAGAGCGACA TTAAGGTTTT GGAGTCAATA GGTGTTCATG GGGTTGGTGC AATAACCGCA
GTCACAGCTC AGAACACCTT AGGGATTAAG CACGTCACTG TTGTAGACCA CAACTCTCTC
AGGAAACAGA TTGAGACCCT TCTGGAGGAC TTCAAGGTGA GCTCAGGTAA GACTGGAATG
ATTGTTAACG GTGAGCAAAT GAAAGTCGTA TTTGAGGCGG TGAATTTCCC ACTGGTGGTG
GATCCGGTAA TCTATGCTAA GGATGGGACA AAGCTCATAG AGGATCTAGA AGCCTTCAAA
AAGTTTCTTC TCCCTCGGGC CACGGTGATA ACTCCCAACG CCGTAGAGGC GGGTATACTC
CTCGGGATGA AGGTAGAAAC TCTGCAGGAT CAGATAACTG CATCAAAGCT CATTCACGAG
AGGTTCTCAG TGCCCTACGT GGTGGTGAAA GGGGGACACG TGAAGTCCTC AGAGAGCGTT
GATGTGCTGT ACGATGGCAA AGAGGTGATC CAGTTGAGTT CCCCAAGATT GCCCGGAAGG
AATACCCACG GAACCGGGAG CATTTTCGCA TCGAGCATTG CCGGAATGCT AGCCAAGGGG
TTTCCTATGA AGGAGGCGGT AAGACGGGCC AAGAGTATCA CGGAGGAAAG TATTCGATAT
GGTCTTGAAA TAGGCAGGGG AATAGGGCCA GCGGATCCCA TGGTCCCGCT GGAGAAGATA
GCCATGAAGG CAGGGGTTAT GAAGGATATG GAGATTTTTG CCGAGTTCGT TGAGAGAGAA
AAAAACTTCT ATCTCCTAGT GCCAGAGGTT CAGTCAAATC TTGCCCATTC CATTGACCCG
AAATACGTTA CCGGAATTGA GGACATAGCC ACGTTCAGGG GAAGGATCAT CAGGGAGTGG
GGTGGAAGGG TGAGGGTAGG GTTCCCAGTG GCCTTCGGCT ATCCCACACA CACTGCAAGA
TTACTATTGT CAATAATAAA TAAACAGGGA GTTGGGGATA CGCTCATTAA CATTAGATAC
GATCCCAAGA TTGTGGAATT ATTGAAGAGA ATCGGATACG AGGTTGTGGA GGTCCATAGG
GAGCTAGAGC CCCAAGGTCA AGAGGGGAAA ACCATGAGTT GGATAGTGGA TCACGTTTAC
GAGAGCTTGG GCAAAATTCC TAACGTGATT TTCGATAGGG GGATGATAGG CAAAGAGGCT
ATGATAAGGC TCTGGACTTC ATCAATAGAG GAAATGATGG AATCCCTGAC CAGTCTTTTG
AGGGAGATAG GGAAATGA
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| Protein sequence | MKKPVVMAIG GFDSGGGAGV ESDIKVLESI GVHGVGAITA VTAQNTLGIK HVTVVDHNSL
RKQIETLLED FKVSSGKTGM IVNGEQMKVV FEAVNFPLVV DPVIYAKDGT KLIEDLEAFK
KFLLPRATVI TPNAVEAGIL LGMKVETLQD QITASKLIHE RFSVPYVVVK GGHVKSSESV
DVLYDGKEVI QLSSPRLPGR NTHGTGSIFA SSIAGMLAKG FPMKEAVRRA KSITEESIRY
GLEIGRGIGP ADPMVPLEKI AMKAGVMKDM EIFAEFVERE KNFYLLVPEV QSNLAHSIDP
KYVTGIEDIA TFRGRIIREW GGRVRVGFPV AFGYPTHTAR LLLSIINKQG VGDTLINIRY
DPKIVELLKR IGYEVVEVHR ELEPQGQEGK TMSWIVDHVY ESLGKIPNVI FDRGMIGKEA
MIRLWTSSIE EMMESLTSLL REIGK
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