Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0632 |
Symbol | |
ID | 5103792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 577891 |
End bp | 578862 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640506536 |
Product | thioredoxin reductase (NADPH) |
Protein accession | YP_001190731 |
Protein GI | 146303415 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00998267 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.636604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCA TTCCACGCTC AACGAATATT AACCCAAACG AGAAATTTGA TACCATCATT ATTGGTCTTG GTCCAGCAGC CTACAGTGCT GCACTATACG CAGCTAGGTA CATGCTAAAG ACGCTTGTAA TAGGGGAGAC GCCAGGAGGT CAGCTAACTG AGGCAGGAGA AGTGGATGAC TACCTGGGCC TCATTGGCGT TCAAGCGTCG GAAATGATAA AGTTATTCAA CGCTCATGTA GAGAAATACA AGGTACCTGT TCTCATGGAC AGGGTAGAGT CCTTTAAAAG AGAGGGCGAG GAATATGTGG TCAAGACCAA GAGAAAGGGA GAGTTTAGGG CTTCTACACT AATAGTAGCA GTGGGAACCA AGAGGAGGAA ACTTAATGTT CCAGGTGAGA ACGAGTTTAT AGGTAGGGGT GTCTCCTACT GCTCCGTGTG TGACGCCCCA CTCTTCAAGA ATAGGCCAGT AGTTGTAGTG GGGGGAGGAA ACTCGGCGTT GGACGGGGCC GAGCTACTTA GCAGGTACGC GACCAAGGTT TACCTTGTGC ATAGAAGGGA AGAGTTTAGG GCTCAACCAA TAATAGTGAA ACTGGTTAAG GAGAAACCAA ATGTGGAGTT GATCCTGAAC TCCGTGGTCA AGGAAATTAA GGGAGATAAG CTTGTCAGGA AAGTTGTGGT ACAGAATATG AAAACCGGCG AGGTAAGGGA GATAGATGCC AATGGAATAT TCGTGGAAAT AGGATTTGAA CCCCCCACTG AGTTCGCTAA GATTAACGGA CTAGAGGTGG ACGAACAGGG TTACATAAAG GTAGACGACT GGACAAGGAC TAACCTACCA GGGGTTTTCG CTGCAGGGGA CTGCACCAAC AAGTGGATTG GATTCAGACA GGTTGCAACG TCAACAGCAA TGGGCGCGGT TGCGGCACAC TCAGCTTATA ACTATTTGAA CGAGAGAAAA GGTAAAACAT GA
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Protein sequence | MSLIPRSTNI NPNEKFDTII IGLGPAAYSA ALYAARYMLK TLVIGETPGG QLTEAGEVDD YLGLIGVQAS EMIKLFNAHV EKYKVPVLMD RVESFKREGE EYVVKTKRKG EFRASTLIVA VGTKRRKLNV PGENEFIGRG VSYCSVCDAP LFKNRPVVVV GGGNSALDGA ELLSRYATKV YLVHRREEFR AQPIIVKLVK EKPNVELILN SVVKEIKGDK LVRKVVVQNM KTGEVREIDA NGIFVEIGFE PPTEFAKING LEVDEQGYIK VDDWTRTNLP GVFAAGDCTN KWIGFRQVAT STAMGAVAAH SAYNYLNERK GKT
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