| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0618 |
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| Symbol | |
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| ID | 5105590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 569249 |
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| End bp | 570424 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506522 |
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| Product | ABC-type Na+ efflux pump permease component-like protein |
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| Protein accession | YP_001190717 |
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| Protein GI | 146303401 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.873609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCTTTACG ATCTCCTCAA AAAGGAATGG ATAGATCTGA AAAGGGATAG GAAGATCCTC
CTTGTCTCAA TTCTCCTGCC TCTTTTCCTT CTCCCCCTCA TAGGGGTAAT AATCTACGCG
TCGGTCGCCT CTCAACCTCC CACCGTGGGA ATAATAAATA ACGATACGTC CAACACACCC
TACGTGAACG AGCTTGCCAG TTACGTTAGG AGTCATGGAG GGATAGTATA CATCAACAAC
TTCACCATAG TCCCAGACGT CGAGATAATT TTCCCCCAAG GGTTTGCTGA AAACATCTCG
AACATAGACA AGGTTGCGAT GGTGAGGGAG ATCGTTTTGA TCTCTTCCCA GAGCAATGCC
CAGAACATAG TGAACAATGG TCTATATCAG ATCCTCTACA ACACGTCTCT GGAGAGGATC
TCGTTCCTGG CCAACGAAAG CCACGTTAAT GTGTCTCCAT CTACCATAAG GGAGCCTCTT
GTTGTGGAAT TGGGCTATAT AAAGCCTACC AAGCAAGTCG CATCAAGTAG CACCGACAGG
CTGGGGCAAC TGGCGAGGGT CATATCTCTT ATCCTCTTCC CTGCAGCAAC CCCTGTAATC
TTTTTCCTGA CGGACGGGAT ACTAGGGGAA AAGGAAAGGA AAACCCTCGA GTCTCTACTT
GCCTCTCCCA TTTCTCCATT CCAGTTTATA TCAGCGAAGC TAATAATTTC CATGGCCCTT
GGTGCTATTT CCTCCTTGGG TGATTTAGTG GGGTTGATAG CCTTCTCTGT ATTTGCTCCC
TTCATAGTAG GCGGAAACGC AGGACTTACC CTGACCTTCT CGCTCTCGGT CGTTATTGCC
TATTTACTCA TGGTTTTGCT CACGGCCTCT ATATCCCTAG TACTGTTGAT CTTAATAGGA
GGCTCCCAAA GGAACATCCA GTTAATTAAC CTTGTTATCA CCGGCTTCGG AATGCTGGCC
TCTTTTTCCT CCCTGGTCCT TAACTTCAGC TCCCTAGGTC CCCTTTCATT CATACTCGTT
ATCCCTTACG TTCAGATTGT GGGAGGTCTA CTTGATGGAG TGTTTGGGCT GACCACCTCA
ATGATCTACC TCTACCTGGG GACCCTTACT GCCTCGATCC TCCTAATCGT GATCTCGTCA
AGGATACTAA ACCCAGAAAG ACTGCTTCTT AAGTAG
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| Protein sequence | MLYDLLKKEW IDLKRDRKIL LVSILLPLFL LPLIGVIIYA SVASQPPTVG IINNDTSNTP
YVNELASYVR SHGGIVYINN FTIVPDVEII FPQGFAENIS NIDKVAMVRE IVLISSQSNA
QNIVNNGLYQ ILYNTSLERI SFLANESHVN VSPSTIREPL VVELGYIKPT KQVASSSTDR
LGQLARVISL ILFPAATPVI FFLTDGILGE KERKTLESLL ASPISPFQFI SAKLIISMAL
GAISSLGDLV GLIAFSVFAP FIVGGNAGLT LTFSLSVVIA YLLMVLLTAS ISLVLLILIG
GSQRNIQLIN LVITGFGMLA SFSSLVLNFS SLGPLSFILV IPYVQIVGGL LDGVFGLTTS
MIYLYLGTLT ASILLIVISS RILNPERLLL K
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