| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0596 |
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| Symbol | |
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| ID | 5105568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 549407 |
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| End bp | 550765 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506500 |
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| Product | TBP-interacting protein TIP49 |
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| Protein accession | YP_001190695 |
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| Protein GI | 146303379 |
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| COG category | [K] Transcription |
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| COG ID | [COG1224] DNA helicase TIP49, TBP-interacting protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.739423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGA TAAAGGAAGT TAGGAAAGTT GAGACTGGAA GAGCAAGTAT ACATAGTCAT
ATTACAGGTC TAGGTGTGGA CGAGAATGGA AAGGCTAAGT TCAAGGCAGA TGGCCTAGTG
GGACAGCTCG AGGCTAGGGA AGCTGCCTGG GTAGTTGTGC AGTTAATAAA GCAGGGTAAA
ATGGCAGGTA AGGGCATCCT CCTCGTGGGG CCACCGGGAA CTGGTAAGAC GGCTCTCGCC
GTGGGCATCG CCAAGGAATT GGGTGAGGAT ACGCCCTTCA ACACCCTCAA CGCTTCGGAA
ATTTACTCTG TAGACCTGAA GAAGACCGAG GTTCTCACTC AAGCGTTAAG GAAGTCCATA
GGCGTGAGAG TGAGACAAAG AAGGATGGTT TACGAGGGAG TAGTAAAGGA CGTTAAGATG
AGGATTGCCA GGAGCAGGAT AAATCCCTAC GTTCAGATTC CTAGGGAGGT GGAATTGAAG
CTTGCCACAA AGGACGAGGA GAGGACTCTC ACTGCTGGGG AAACGATTGC TGAACAGATT
AGCAAGATGG GAATAAGGAA AGGCGACGTA ATATGGATAG ATGCGGAGAC AGGAAACGTA
GTCAAGGTGG GAAAGGCTAA GGACGTTGAG GGAGCTAAGA CCTTTGACAT AGATACCGCA
AGGACAGTAG AGATCCCCAG TGGACCGGTC AAGAAGGAGA AGGAACTCAC TAATACGTTC
ACCCTTTATG ACCTGGATCT AACCCTCGCA GCCCAGAGCA TCTCCATTAC AGCGTTGTTT
TCCCTTTGGA GCGAGAGGGA GGTGAGCCAG GACATCAGGA AACAGGTAGA TGCCTACGTG
AAGGACATGA TTAACAAGGG TACAGCCGAG CTCATACCTG GGGTGTTGTT CATAGACGAC
GCGCACATGC TGGATATAGA GACTTTCTCG TTCCTCACTA AGGCTCTGGA AGCGGAGTTG
GCTCCCATCC TAGTTTTAGC CACGAATAGG GGGACAACTA AGATAAGGGG TACGGACGTT
GAGGCACCTC ACGGCATGCC CCTGGATCTG CTTGACAGGC TTCTCATTAT AACAACTAGG
CCGTACAGTA AGGAAGAGAG CAGGGAAATC ATTTCCATAC GTGCAGAGGA ATTAGACATC
GAGCTGGAAC CTGCTGCGCT AGATGAGCTC ACAAGCATGG CTGCTGAGGA AAGCCTCAGA
TACTCTATCC AGCTACTCGA GCCATCACAG GTGATAGCAA GGAAGGCCGG GAGGGGTATA
GTCAAGGCAG AAGACGTCAA GGAGGCATCT AGGTTATTCA GTGACTTGAA GAGAAGCGTT
AAATATGTAA AGGAGTATGA GAACCTATTC CTTAAGTGA
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| Protein sequence | MAEIKEVRKV ETGRASIHSH ITGLGVDENG KAKFKADGLV GQLEAREAAW VVVQLIKQGK
MAGKGILLVG PPGTGKTALA VGIAKELGED TPFNTLNASE IYSVDLKKTE VLTQALRKSI
GVRVRQRRMV YEGVVKDVKM RIARSRINPY VQIPREVELK LATKDEERTL TAGETIAEQI
SKMGIRKGDV IWIDAETGNV VKVGKAKDVE GAKTFDIDTA RTVEIPSGPV KKEKELTNTF
TLYDLDLTLA AQSISITALF SLWSEREVSQ DIRKQVDAYV KDMINKGTAE LIPGVLFIDD
AHMLDIETFS FLTKALEAEL APILVLATNR GTTKIRGTDV EAPHGMPLDL LDRLLIITTR
PYSKEESREI ISIRAEELDI ELEPAALDEL TSMAAEESLR YSIQLLEPSQ VIARKAGRGI
VKAEDVKEAS RLFSDLKRSV KYVKEYENLF LK
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