Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0595 |
Symbol | |
ID | 5105567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 548951 |
End bp | 549421 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640506499 |
Product | NUDIX hydrolase |
Protein accession | YP_001190694 |
Protein GI | 146303378 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.652543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTGCG ATGCGGCAGT AGTCTTGATT TTCAGGGATG ATGGGAGATT CCTCTTAATT AAGAGGGCTG ATCAGAAGGG AGATCCTTGG AGCGGACACA TGGCGCTTCC AGGCGGGCAC AGGGAGGTAA ACGAAAGCTG TGAGACTACC GCTGTGAGGG AGGCGCAGGA GGAGGTAGGA ATTACGCCCA CAAACTTGAG CTATCTTGGA ATGTACTCTC CACACAACAG GGAAATGCGC GTTGCTGTGT TCGTTGGACA TACAACCTCT CCCCAGGTAA AGATAGATGG GGAGGTGGAC AAGTGGTTTT GGGTTCATCC CAGCGAATTA AAGGAGGAAA AGGATCATTT TGTTTACCAG AGCTATATCA TTTGGGGAAT GACCTACAGA ATACTAAAGG ACTTCCTTTC AGCCCGGCAA CGATCAAGTC ATCAAGTCCA AGCCGTCGAC CAGTCATCAC TTAAGGAATA G
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Protein sequence | MECDAAVVLI FRDDGRFLLI KRADQKGDPW SGHMALPGGH REVNESCETT AVREAQEEVG ITPTNLSYLG MYSPHNREMR VAVFVGHTTS PQVKIDGEVD KWFWVHPSEL KEEKDHFVYQ SYIIWGMTYR ILKDFLSARQ RSSHQVQAVD QSSLKE
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