| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0588 |
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| Symbol | |
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| ID | 5105560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 541480 |
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| End bp | 542784 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506492 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001190687 |
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| Protein GI | 146303371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.894374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.71791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGCC TATCCAAAAG GCTCAAAATA AGGGAATCCT CGCTACCTGC CTACCTAGTT
TTCAGTCAGT CCTTGGCATC CATTGCTCCT CTAAGCTCGA CGGCGGCTTA CCTAACAGCT
ACTCTTCTCC TGGCTGGAAC CTCTAGTGGT ATTGCCTCAA TACTGGGCGT GTTGATGTAC
TCCCTTTGGG TCTATGTGGG ATATCAGCTC TCGAGGTTTT TCCCATCTGA GGGAGGGACC
TACACCTTTT CTAGACATAT GTACCCTGAA AGGGTTGCAA CTATTCTGGG ATGGATGTAC
TGGGGGAGTT ACATGTTTTA CCTGATATCT ACCTCAACTT ACGCTACCGG AGTGCTTCTC
CCTCTTCTAG GAGCACCGAT TTCCATAGAC CGGTTAATGG AGGTTGTGCT TCCATCAGCT
ATAGTACTGC TCATGATTAC CGGGATCAGG CCACCGCTTT ACTATAGTCT AGTAACTTCA
CTGGTGGAGA TTGCCGTAAT CGTGGTTCTG GGCATAACGG TGATTGCACA TAGGGGGCTT
TCCCTAGTCC CGTTAACGCC CTCCGCGGGA CTGTCTCAGG TGTTAAGCGG GGCCATGGCC
ACCTCTTTCT CGATAGCTGG TGGTGGTGCT GCCTTCTTCC TAGGGAAGGA GGCCAGAGGA
AAGGGAAAGA CTGTAAGCAA GTCTTACCTG TTGGCATTTC TCCTTGCCTC CGGAGCCATA
GTGTTCTCCT CGATTTACCT CGTAACAGCT GGAGGTTCAA CTCAGGGAGT TGAAAACCTA
GCCAATACTG GCTTTCCCGG TCTTACTGTC GCGAATCAGT ACATGGGAGA ATCCTTTGCC
TCAGCTATGC TACTACTTAC TGTGAATAGT TTAATTGGTT CTCTAATTGC AGCCTACGTG
GCCTTATCTA GACTGACCTT TTCCCTGCTT AGAACTGACT TACCAAAGTC TACCCTTATT
GTGGGTTCCC TCTTCCTGGG AATCAACGGG GTAATAGCTG GGCTGGGGAA TCTAGTACAG
TGGTATCAAT ACTTTTTCCT GGGCTCGTTA ACCGCACTCT TCATCACACA TGCCTCGCTT
TCCCTAGGCC TTCCCAAGAT CAGGAATAAG CTAGCCTTAA GCCTTCTCAA GTCCTTTCCG
GGGATTCTCT CAGCCCTTCT CATGATGGTA GGCCTTTACT CCATTTACCT TGAGGTTGGA
GAGGAACTGG TTGTGGGGAT CTTAGCGTGT ATAGTTCTCG TCATGGTAGG AGTGATTCAG
GGCCTAATAT CCCGAAGAGG GGAGGGAAAG AGTAATATTT CATGA
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| Protein sequence | MASLSKRLKI RESSLPAYLV FSQSLASIAP LSSTAAYLTA TLLLAGTSSG IASILGVLMY
SLWVYVGYQL SRFFPSEGGT YTFSRHMYPE RVATILGWMY WGSYMFYLIS TSTYATGVLL
PLLGAPISID RLMEVVLPSA IVLLMITGIR PPLYYSLVTS LVEIAVIVVL GITVIAHRGL
SLVPLTPSAG LSQVLSGAMA TSFSIAGGGA AFFLGKEARG KGKTVSKSYL LAFLLASGAI
VFSSIYLVTA GGSTQGVENL ANTGFPGLTV ANQYMGESFA SAMLLLTVNS LIGSLIAAYV
ALSRLTFSLL RTDLPKSTLI VGSLFLGING VIAGLGNLVQ WYQYFFLGSL TALFITHASL
SLGLPKIRNK LALSLLKSFP GILSALLMMV GLYSIYLEVG EELVVGILAC IVLVMVGVIQ
GLISRRGEGK SNIS
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