| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0570 |
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| Symbol | |
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| ID | 5103730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 522732 |
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| End bp | 524372 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506474 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001190669 |
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| Protein GI | 146303353 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTC CTATAAGTGG ACTGGTAAAC TTCGTTAAAC AAGTATTCCA GCTGGACAAG
GATTGGCTAT CTAGGATAAC CATGGCAATG ATTGTGATGA GCCTCATTTG GGGGATGTTA
GGGATAATTG ATGCCCTCAT GGCCAGGATA CAAGAGGCGG TCTGGGCAAC CTCCTCAAAC
TTCATACTCA CGTCACAGGA ATATTATGGA TCCATCACCC TTCATGGTGC CAGGGATCTA
TTCGGGTTCG CGGTTCAGCT GGAGATAGCG GTGTTCGCGT TCTTGTCTCT TAGAATTTTG
AAGTTAGAGC CTAGGGCTAA GTGGTTCATG AACCTTTCCT TCATCATCTT CAATATCTCC
TTCATGCTAC TTGAGGGGCC CATAGTTCTT TACCCGACCT TCAATGACAA CTACTTCTCT
GCGGGCTCTT GGTATTACTT AGCTCCCCTA GGTTTGCCCA ACTACTCACA GTACGTCCTT
AGCCCCCTCT GGTATGTGGG GATGGAGCTC CTGGACATTG GTACCTACAT GTTTGTGATC
TGGCTGATTT ACCACTTCTA CTTGGCCTCT AAGACCACGA AGGAGAAGTT ACCCATCTTC
ACAGTTTACG CCCTAATGAC TGCGCTAATG ATAGCGATTG GGTGGAGCGG TGAGGCAGCA
GCCAACACGT GGGACCTCCT CGCAATTGCC GGAATCACTG GAATGAACGT AATCGCCAAC
CAGATTGCCT TCTGGATTCT GGGTCACTCC ATAGTGTACA TAGTCTGGAT GCCCGCCATA
GCGTCGATGT ACTATCTTAT CCCACTTCTG GCTAACAAGC CACTTTACAG CGATAAAATG
GCAAGGATAG CTGCACTCAT GTACTTGATC TTTTCCAACA ATGTTCCGAT TCACCACCTC
TACATGGTAA ACTTCCCAGT CTCGGTTAAG GTGATGCAGG AAGTGCTTAC CTATGCCGTG
GTTGTGCCCT CCATGCTAAC GTTCTTCAAT TTATGGGCCA CCGTGAAGGG GGCATCAGTT
AAGATCAACT TGATCTCCAT GTGGATAAGT ATAAGTTTCG CTGGGGCTAT TGCGGCAGGC
GTAACGGGAA TCTCTAACGC CAACATAGCC TTTGACTCAA TCATTCATAA TACCATGTGG
ATTCCGGGAC ACTTCCATGC AATGATATTC TACTCCATCG TTCCTGCCGG TTTTGCCACT
CTCTATTACA TGGTACCCAT GCTGACGGGG AGGATGTGGT TCTCCTCTAA GATTGGATGG
CTACACATGG TAGGATACAT GATAGGAACC ACAATGGTTG TGTACGGATT TGATGCTCTT
GGCTTAGCAG GGCTCACCAG AAGGGCTGAG GTGTTCCCGA GAACTCCCGT GTACGTCACC
CCCGAGATAA TATCTGCCCT GGGTGCACTC ATTGCTGATG CTGCAACATT GGCCTGGCTA
GGGAATCTGG TGTTGACACT CCTTAAGGGA AGGACTGCCA ACCTGGAAGG TCTTTCCATG
GGTGAGGCAA TAAATACTGT AGCGTTGCAA CTGGAAGCTC CAGAGCTCTC TGGTTTCAGT
GCTCCGAGCG TTATAGGACT AATAAGAGCT GAAGAGAACA AGATAAAGAG CTTCTTCACC
AAGGCAAAAG TGATCAAATA A
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| Protein sequence | METPISGLVN FVKQVFQLDK DWLSRITMAM IVMSLIWGML GIIDALMARI QEAVWATSSN
FILTSQEYYG SITLHGARDL FGFAVQLEIA VFAFLSLRIL KLEPRAKWFM NLSFIIFNIS
FMLLEGPIVL YPTFNDNYFS AGSWYYLAPL GLPNYSQYVL SPLWYVGMEL LDIGTYMFVI
WLIYHFYLAS KTTKEKLPIF TVYALMTALM IAIGWSGEAA ANTWDLLAIA GITGMNVIAN
QIAFWILGHS IVYIVWMPAI ASMYYLIPLL ANKPLYSDKM ARIAALMYLI FSNNVPIHHL
YMVNFPVSVK VMQEVLTYAV VVPSMLTFFN LWATVKGASV KINLISMWIS ISFAGAIAAG
VTGISNANIA FDSIIHNTMW IPGHFHAMIF YSIVPAGFAT LYYMVPMLTG RMWFSSKIGW
LHMVGYMIGT TMVVYGFDAL GLAGLTRRAE VFPRTPVYVT PEIISALGAL IADAATLAWL
GNLVLTLLKG RTANLEGLSM GEAINTVALQ LEAPELSGFS APSVIGLIRA EENKIKSFFT
KAKVIK
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