Gene Msed_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0556 
Symbol 
ID5103716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp511336 
End bp511998 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content47% 
IMG OID640506460 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_001190655 
Protein GI146303339 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTGA CAGTAATCAA TCAAAAGGGA GGAGTAGGGA AGACAACAAC GGCAGTGAAT 
CTAGCGTATG CCCTGTCCAA GGGAAGAAAC GTGGGTCTTC TTGACATTGA TCCTGAGGGG
GGTACTTCTT TCTCCTTTGG CATAAGGAGG GATAAAAAGG AGTTTCCCCT GGGAGGAAAA
AGCGTGAATA TCTTTAATAT CGAGATCTTC CCTGCCCACC TAGGGCTATT GAAACTGGAA
CTGGGTGGAG AAGTTGAGGA AGTAGTTAAA TCGATAAAAT CGATTGCAGA AGGTTTTGAC
GTTTTAGTGA TAGATACCCC GCCCAACTTA GGAACACTGG CAGTTGCTTC CATGATAGCT
GCGGACAGGG TTATTTCACC CGTGACGCCA CAACCCTTGG CCATAGAGGC GGTGAGAAAT
CTAGACTCCA GGCTCCAGAG TCTAGAGAAA AGGGCCATAG CCTTCGCCAG CATGTCAAAG
AAGCCGATGG ATATAGAACT TAGGGCTGTG AAGTTTGTCC AGATCTACGT TCCACCGTCA
AAGCTCTTCT CTGAATCCTC TAGACTCGGT GTTCCCGCCT CTAGATATGA GGAAGTAAAG
CTGAAGAAAC CCAAGATAGC CAAGATCTAC GAGGAATTGG GAAAGGTGGC TCTGAGTGAG
TGA
 
Protein sequence
MIVTVINQKG GVGKTTTAVN LAYALSKGRN VGLLDIDPEG GTSFSFGIRR DKKEFPLGGK 
SVNIFNIEIF PAHLGLLKLE LGGEVEEVVK SIKSIAEGFD VLVIDTPPNL GTLAVASMIA
ADRVISPVTP QPLAIEAVRN LDSRLQSLEK RAIAFASMSK KPMDIELRAV KFVQIYVPPS
KLFSESSRLG VPASRYEEVK LKKPKIAKIY EELGKVALSE