| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0532 |
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| Symbol | |
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| ID | 5103692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 488906 |
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| End bp | 490033 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506436 |
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| Product | signal-transduction protein |
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| Protein accession | YP_001190631 |
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| Protein GI | 146303315 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0376075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCT CAGAGCTCAT GGTGAGCCCA TCCCTAGTTG CTAATTCCAA TGATAAACTT
AGGGATGTGC TCAACAAAAT GAAGGAAGCT AACCAGTGGG TTGTTCCAGT TGTTAACAAC
AAGAAGCTTG TGGGTATTCT CTCCTTCAAG GAACTCATCA GGAGAAGGGT GAACCTGGAG
ACAAGGATCA TAAATGTGTC TTCCCCCGTT ATCTCCCTGT CTAAGAATGA CGACTTCAAC
AAGGTGATAG TCAAGTTTTA CACGACCAAG GCCAGGGCCA TCCCCGTCAC CGATGACTCC
AGAAACCTTC TGGGGATTAT CACAAGGGAA CAGGTTCTTT CCTACCTTCT AAACTCAGGT
CAATTGGAGA CTGGGAGGGC AAGGGAGTTC ATGAGTTCCC CGCCTGTTAC CCTTTCCCCA
GAGGACTCAG TTGCCAAGGC TAGATGGATT ATGGTTAGAG ACAACATCTC AAGGATTCCA
ATTGTCCAGG ACAAGAAGCT CGTGGGAATA GTTACCACAA GGGACATAGT TAACGCCCTC
TACACTCCAC TTAGCGAAAG GAAGAGAGCC TCAATCCTAA GCGAAGAGGA GAGGGTTATG
GCTAGCCCCC TGAAGGAAAT AATGGTTTCC CCTGTGATCA CGGTGTCTGG AGTTGATCCG
CTCAAGGAGG TTGCTCAAAA ATTGTTGAAG AACAAGATCT CGGGAGCTCC GGTCATGGAG
GGTGACTTTC TCTCAGGGAT CATAAGCGGA ATAGACATCA TAAAGTCTCT CGAGTCCAAG
TTCCAGCTCT CAATGCCCAT AGAGGCGAAG CTCACCTCAG GCCTCAGGAA CAAGGAGCTA
AAGGCACAGT TGGACGGCGT TCTAGAGAGG TACCTATCGA AGCTTGAGAA GTTCGTGGAT
ATAAACAACT TCAGGGTTTC CTTCAAGGAG GAGGCCTCCA GTCAGGGCAG GCCTCTCTAC
AAGGTCTCGG TAAATATCTC CACGAAGATA GGTAATTTCG TGGCAAACGA CAGCGACAGG
GATCCAGTGG CTGCAGTAAA GAGGGCCGTG GACACGTTGG AGCAAAGGCT AATAAAAAGA
TTAAAGAGAA TCCAGGAGAA AAAGGGTGAC AAGGAAGAGG TAATTTGA
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| Protein sequence | MSASELMVSP SLVANSNDKL RDVLNKMKEA NQWVVPVVNN KKLVGILSFK ELIRRRVNLE
TRIINVSSPV ISLSKNDDFN KVIVKFYTTK ARAIPVTDDS RNLLGIITRE QVLSYLLNSG
QLETGRAREF MSSPPVTLSP EDSVAKARWI MVRDNISRIP IVQDKKLVGI VTTRDIVNAL
YTPLSERKRA SILSEEERVM ASPLKEIMVS PVITVSGVDP LKEVAQKLLK NKISGAPVME
GDFLSGIISG IDIIKSLESK FQLSMPIEAK LTSGLRNKEL KAQLDGVLER YLSKLEKFVD
INNFRVSFKE EASSQGRPLY KVSVNISTKI GNFVANDSDR DPVAAVKRAV DTLEQRLIKR
LKRIQEKKGD KEEVI
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