| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0522 |
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| Symbol | |
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| ID | 5103682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 478226 |
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| End bp | 479185 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506426 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190621 |
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| Protein GI | 146303305 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1814] Uncharacterized membrane protein |
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| TIGRFAM ID | [TIGR00267] conserved hypothetical protein TIGR00267 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.655797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.060241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAGAGT TAGTTAACAG GAATTATAGG GCAGAGCTGT TCGGTGAGGA ACTTTACTCT
GCTCTTGCCA GGGACGAAAA GTCCGAGAAG GTCAGGGAGG TACTACAGGA ACTCTCTGAG
GGAGAGGGAA GACATGCTAA GTTCTGGGAG AGTATAGCCA GAAGCAGAGG GATTAAGCTG
AGGGGATTGG GATTTCTGGA CAAATTGAAG CTCTGGATCT TGCGAAGACT CAGGAAAGTT
CTGGGTCTAG CCCTAGTCCT AAAGATGGTT GAGGCGGGCG AGGAGAACGA TGCTGAGAAA
TATTACCGCT TCTCCACCTC GCAAGAGTTT ACGGACACGG AGAGACAGGG CTTCAGGGAC
ATTATGATGC AGGAAATGGT CCACGAAGAT ATGCTCATAC AGACGCAGGT GAACGTGGAT
ACTGTTAGGG ATACCATCTA CGCTATTAGC GATGGCCTAA TCGAGGTACT AGCTTCGGTG
TCAGGACTTG CAGGTATATT CTCGGTTCCC CTTTATGTAG CACTGGGAGG ACTCATCGTA
GGAGTATCGG GAATGATATC CATGAGCATT GGGGCTTATC TTTCGGCGAA ATCTGAGGAG
GACATAAGGA ACAATGCCCT CAGGAAGGCT AGGCTGAGGA GTCTTCTAGA AGGGGAGAAA
CATGAGGAGG ACCAGGAGGT GTCCAGAACA GGGGAGAGTG TGAGAACCAC TGCGATCTCC
TATATCATGG GAGCGATAAT TCCAATCCTA CCCTTTCTCC TGGGTTTAGG CGGTCTAGTT
GGCTTGGTTA CCTCATATGC CGTGACTGGT GTCGCCACTT TCATAGTGGG TGCGCTCATA
GGTGTACTCA GCGATGTGAG CCCCTGGAGA AAGGGGGCGG TAATGACTGG GTTGGCGCTG
GGAGCAGCAC TAGTGACTCA CGTTCTGGGA CTATTGGCAC ATCTAGCGGG TTTTTCCTAA
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| Protein sequence | MEELVNRNYR AELFGEELYS ALARDEKSEK VREVLQELSE GEGRHAKFWE SIARSRGIKL
RGLGFLDKLK LWILRRLRKV LGLALVLKMV EAGEENDAEK YYRFSTSQEF TDTERQGFRD
IMMQEMVHED MLIQTQVNVD TVRDTIYAIS DGLIEVLASV SGLAGIFSVP LYVALGGLIV
GVSGMISMSI GAYLSAKSEE DIRNNALRKA RLRSLLEGEK HEEDQEVSRT GESVRTTAIS
YIMGAIIPIL PFLLGLGGLV GLVTSYAVTG VATFIVGALI GVLSDVSPWR KGAVMTGLAL
GAALVTHVLG LLAHLAGFS
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