Gene Msed_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0511 
Symbol 
ID5103671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp467281 
End bp468381 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID640506415 
Productradical SAM domain-containing protein 
Protein accessionYP_001190610 
Protein GI146303294 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00485755 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00020138 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATAAGCA TATCTAGGCT GGTGTCTGAT AGGAAGGAGG AGGCTGACAG GATAAGATAC 
GCTGGCCTGA AGGACAGGTA TCCCTCAGTA CTAGTGTTCA ACGTAACTAG AAACTGTAAC
CTGAGATGTC TCCACTGCTA TTCCGGATCA GGAACTCAAC TATTTCAGGA CCTTCCTCTC
TCCACGTGGA TTAATGCGGT GAAGCAGGCA TCAGATATGG GAGTAAAGCA TATCCTTCTC
TCAGGAGGGG AACCCTTGGC GAGGAGAGAC CTTCACCTGA TAGCTAGGGA GGCATGGGAG
AGGGGAATAA GGGTGGAGCT GTCCACCAAC GGGACCATGT TAACTAGGGA GAGGTTGGAG
GAACTCAAGA ATTACGTGGA CTACGTGGGA GTCAGTTTGG ACGGACCAGA GCCCATACAC
GATAAATTCA GGGGGGTGGA AGGTGCCTTC GCGAAGGCCT TGAAGGGAAT TAGGACGGCA
AAGGAGATAG GTCTAAAGAC GGGACTTAGA TTCACGATCA CGAGGGAGAA TTACGAGTAC
GTGGACTTCG TGTTTGACTT GATGAGGAAG GAGGGGATTA ACAGGGTATG CTTTTATCAC
CTAGCCTATG CTGGAAGGGC AGACAAGAAA CTAGACGTGG ATAATTTCAC TAGATTGAAG
GTAGTGAGTA AGATAGTGGA ATATGCCAAG TCAGGGGAGT GGGAGGTCCT GACAGCGGAT
AACCCGGTAG ACGGAGTCCT GGTGTATCAC TTGACGGGAA AGGAGAAGGT CTTAGAGCTA
CTCAGGAGAA ATGGAGGAAA CAAGTCAGGT GAGAGGATAG CTGACGTTAA CCCAGAGGGT
ACGATTTACC CAGATCAGTT CACTCCAGTG AAGATAGGTG ACATCACAGA CCTGAAAAGA
ATATGGGACG AACCACATCC CATGGTGAAG AAACTTAGGG AAAGAAAGTC CTTGGTTAAG
TGTTCTTCCT GCAAGTTCTT CGACGTGTGT AACGGCGGGC TAAGGGGAAG AGCTCTGGCG
GTCACAGGCG ATATGTGGGA GAAGGATCCG TCGTGCTATC TAGACGAAAT AGAGAAAATA
AAGGAGAAAA TAACTTTTTA G
 
Protein sequence
MISISRLVSD RKEEADRIRY AGLKDRYPSV LVFNVTRNCN LRCLHCYSGS GTQLFQDLPL 
STWINAVKQA SDMGVKHILL SGGEPLARRD LHLIAREAWE RGIRVELSTN GTMLTRERLE
ELKNYVDYVG VSLDGPEPIH DKFRGVEGAF AKALKGIRTA KEIGLKTGLR FTITRENYEY
VDFVFDLMRK EGINRVCFYH LAYAGRADKK LDVDNFTRLK VVSKIVEYAK SGEWEVLTAD
NPVDGVLVYH LTGKEKVLEL LRRNGGNKSG ERIADVNPEG TIYPDQFTPV KIGDITDLKR
IWDEPHPMVK KLRERKSLVK CSSCKFFDVC NGGLRGRALA VTGDMWEKDP SCYLDEIEKI
KEKITF