| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0501 |
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| Symbol | |
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| ID | 5103662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 455954 |
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| End bp | 456934 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506406 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001190601 |
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| Protein GI | 146303285 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0723] Rieske Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03171] Rieske iron-sulfur protein SoxL2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.441209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGTTAA AAATTAGGTT AGGGAACGGC GAGAAGGGTG TCCTGAAGAC TTCAGATCTG
TATTTCATAC AGAAATTACT TAGGACCATG AGGAATCCCA AGACTAGGTT CGATAGCAGG
GAGTTTGTAG AGAAAGGCGA GGATTACCTG TTTAACTATG TGGGGAAAAA TGTGGGCGGA
ATTGATGAGG GGAGAAGAAA CTTCCTAAAG GGAATAGTCA TAGGTGTAGC CGCCGCGACG
GTGGTTGGAA TAATCCCCGG GCTAAGAGTT CTTGTTCCGC CAGTGGAGCA GGCTACTGGC
TTCCCCAAGT CCCTTCTGGT AGATGTGTCA GGGAACCCGT TGAAGGCGTC CTCTATCCCA
GTGAACAGCC CCATAATCAC TCTATACGAG TATCCTCTAA CAGGTGAACC CAACTTCCTC
CTCAATCTGG GCGATAAGTC TGGTAATCCG GTCTCCATTG CGCCCGTGGA GGTGTCCGTT
CCACAAACTG GGAAGACGTA CAAGTTCCCT GGAGGCGTTG GACCAAATAA CTCGATCGTA
TCCTACTCTG CCATATGCCA GCATCTAGGT TGTACGCCTC CGTACATACA TTTCTATCCT
CCTAACTACG TGGGACCCTC ACAGCTCACC GCTCCAGAGC CTAACACGCT GACCGCTCAG
GCCTTGCTAG CCGCAAAGCA GGCCAATATC CCAGCATTGA TCCATTGTGA CTGCCACGGT
TCCACGTACG ATCCCTATGG GGGAGGTGCT GTATTAACAG GCCCTACGCA AAGACCGTTA
CCCGCCGTTA TCCTTGAGTA TGACAGCTCC ACAGACTACC TTTACGCGAT AGGGGCCATA
GGTGTTGCCA CTTACCCAGA GGGATCAGAC GGCGTACCAT CACAAGATCC CACAAAGGAT
CTGGATACCT CTCAGTACGG CAGTTCGGTG GGAAGTAAGA CACAGGTACA AGCTAGCACG
AACCCGTTCT CGGGTTCATG A
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| Protein sequence | MPLKIRLGNG EKGVLKTSDL YFIQKLLRTM RNPKTRFDSR EFVEKGEDYL FNYVGKNVGG
IDEGRRNFLK GIVIGVAAAT VVGIIPGLRV LVPPVEQATG FPKSLLVDVS GNPLKASSIP
VNSPIITLYE YPLTGEPNFL LNLGDKSGNP VSIAPVEVSV PQTGKTYKFP GGVGPNNSIV
SYSAICQHLG CTPPYIHFYP PNYVGPSQLT APEPNTLTAQ ALLAAKQANI PALIHCDCHG
STYDPYGGGA VLTGPTQRPL PAVILEYDSS TDYLYAIGAI GVATYPEGSD GVPSQDPTKD
LDTSQYGSSV GSKTQVQAST NPFSGS
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