| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0500 |
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| Symbol | |
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| ID | 5103661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 454262 |
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| End bp | 455908 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506405 |
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| Product | cytochrome b/b6 domain-containing protein |
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| Protein accession | YP_001190600 |
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| Protein GI | 146303284 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.847294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAA CAAAAAGGGT TTCAAACTGG TTTTCGGAGA GACTAGGATT AAATGACCTA
CCTTTCTTCA AGACTCCAGA CTACATGTAT CACGTTAACG AATGGTTAGG CGCGTTGGTC
GCTGCATCAT TTATCTACAC CGTGATATCT GGCCTAATAC TTCTGCTATA TTATAACGCA
GCAGCAGGTT ACCAGTCAAC TGAGACCATA ATCAATCAAG TGCCCTATGG GTCCGTGGTG
CTCTATAGTC ACCTATATGG CTCCTACGCC ATGATTATCC TGGCTTACGT TCACATGTTT
AGGAACTATT TCGTGGGAGC ATATAAGAAG CCAAGGGAAC TCCTGTGGAT ACTCGGCGTT
TTAATGCTCG TCCTCACCCT AGGAGCTTCC TTCCTGGGAT ATAGCCTTAT TGGGGACGCC
CTCGCAGTTA GCGCTGTTGA CGTTGGTGCC GGAATCATCA CCTCAATTCC GCAACTGTCC
TTCTTAATAC CCATCATCTT CGGGAATTAT GACACTGGAG ACTACACGAG AGTACTTGCG
TTGCACATTA TCCTAGTGGC TTTAATAGGT CTACTTTTCG TGTTCCACTT CTTCCTTGCG
GAGCAGTATG GAATGATGCC CTCAAGGAAG GTAAAGCCAA AGGCGCCTGC GGTTTACACC
AAGGAGGAAT GGTCTAAGTT TAATCCATGG TGGCCTAGGA ACTTCGTTTA CATGAGCTCG
CTGATTTTCA TGACTTGGGG TTTCATTCTA GCTATCCCGA ACGCGCTAGC CTACCTAAAC
GGACTGCCAC AATACTTCGA TCCCTTCATG AACCCGAAGC CAGCTCCTCC ACCCAACAGC
CCTGCTGCAG CGCATATTAC AACCTATCCA CCGTGGTTCT TCCTGTTCCT CTACAAGATC
GCAGACTTCA CCAGTGACGT GGTAATATTT CTAATGATAG GTGTAATAAT ACCACTGGTA
TACCTCATCA TCTTGCCATT CATAGATAGA AGCGACGAAC TTCACCCGCT CAAGAGGAAG
GTATTCACTG GGATAGGTAT CCTCATGATT ACGTACCTTA TACAAACCTC CCTGTGGGGA
GATCTTGCTC CCGGAGTTGA AGTAAGTATT AAGGAACAGG TTATCGCTTA TCTCATACCG
GCAATTATAG TAGCTCTAGG TTTAACCTTC ATTAAGCCAA TGGACGTCAA GACGAAACAG
GTCAGAGGAA TATCACCCCT TACATCTCTA CTCTTCGTGG TGGTGGCAAT GTTGTTCGCT
GGTTCCGTCG TGGAGCTAAT CGACTATCCA AGCCTGTTTA CCTTTGCGGT CACGCTATTC
ACGGGCTCGC TATTCTTTAT AGGAAGTAAG ACCATGGGCA AGGTAGTTCT GAGTAAGGGT
TTTCCCAACA ATGCTGTACC TGAAGTCAGA ACAACCACTG AGACTCCCAC CTCCAATGAG
ACCAAGAGGA AGTTCGCGGA GGTTCTCATG AGCATTCTCT TCATTCTAGT TGTGATAATA
GTGGCGCAAA TGTGGACTAT CCCTCCAACT GGCTATGCCT CAAACCTGTT CGGAGTGGAT
CTGGGACTGG TATTTCTAAT GCTGGGAGAG GTAATCTCTC TCTACCACTA CGTGGTCTAC
AAGAAGCCCG TTGAGAAGGA AGAATAA
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| Protein sequence | MSLTKRVSNW FSERLGLNDL PFFKTPDYMY HVNEWLGALV AASFIYTVIS GLILLLYYNA
AAGYQSTETI INQVPYGSVV LYSHLYGSYA MIILAYVHMF RNYFVGAYKK PRELLWILGV
LMLVLTLGAS FLGYSLIGDA LAVSAVDVGA GIITSIPQLS FLIPIIFGNY DTGDYTRVLA
LHIILVALIG LLFVFHFFLA EQYGMMPSRK VKPKAPAVYT KEEWSKFNPW WPRNFVYMSS
LIFMTWGFIL AIPNALAYLN GLPQYFDPFM NPKPAPPPNS PAAAHITTYP PWFFLFLYKI
ADFTSDVVIF LMIGVIIPLV YLIILPFIDR SDELHPLKRK VFTGIGILMI TYLIQTSLWG
DLAPGVEVSI KEQVIAYLIP AIIVALGLTF IKPMDVKTKQ VRGISPLTSL LFVVVAMLFA
GSVVELIDYP SLFTFAVTLF TGSLFFIGSK TMGKVVLSKG FPNNAVPEVR TTTETPTSNE
TKRKFAEVLM SILFILVVII VAQMWTIPPT GYASNLFGVD LGLVFLMLGE VISLYHYVVY
KKPVEKEE
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