Gene Msed_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0498 
Symbol 
ID5103659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp453201 
End bp453938 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID640506403 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_001190598 
Protein GI146303282 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAGGG AGGTAAAGCG GGAAATTAGG GAGAGAATCT GGAGATTAAT GGAGGAGAAG 
AACGTAGCTT CGTTCCCTAG ACCCGTGAGG GGGAGAATAC CCAACTTCAA GGGAAGTGCC
GAGGCAGCCA GGATTCTTTC AGAGACCCAA GAGTTCAGAA ACGCGAGGGT CATCAAGTGC
AACCCTGACT CTCCTCAGGC ACCCCTCAGA GAACTGGTCC TGAGATCGAG GAAGGTGTTA
CTGGTCCCCA CCCCAAGGTT GAGGGGAGAG TTCTTCCTTA TGACTGAAAA GGCCTGGGAG
AGTCCCAGGG AAGCCTCAAG GATTTCAAAC TTTTCCTCCT TCGGGGAAAG GGTTCACTTT
AGGAACATAC CAAGGATAGA TCTAGTCGTA GTGGGTTCGG TTGCGGTTTC GCAGGATGGA
GGCAGGGTAG GAAAGGGAGA AGGTTACAGT GAGCTTGAAT ATGCCATCCT CAGGGAACAG
GGCTTGGTGG ATGAAAAGGT ACCAGTCGTC ACCACGGTGC ACTCTATCCA GGTTGTGGAT
AGTATTCCGT TGGAGCCCTT CGATGTCCCC GTGGACATTT TTGCAACGGA AAAAGGACTC
TTTAGGACTC CATCCAAACC TAAACCTCAG GGGCTCCTTC TTGAGTACTT AACCCCAGAG
AAGATCCTAG ACACCCCTTA CCTCCTGGAA TATCTAAAGG AGACGGGCAG GCTTAACAAG
GTTCTTCGCA GAACCTAG
 
Protein sequence
MEREVKREIR ERIWRLMEEK NVASFPRPVR GRIPNFKGSA EAARILSETQ EFRNARVIKC 
NPDSPQAPLR ELVLRSRKVL LVPTPRLRGE FFLMTEKAWE SPREASRISN FSSFGERVHF
RNIPRIDLVV VGSVAVSQDG GRVGKGEGYS ELEYAILREQ GLVDEKVPVV TTVHSIQVVD
SIPLEPFDVP VDIFATEKGL FRTPSKPKPQ GLLLEYLTPE KILDTPYLLE YLKETGRLNK
VLRRT