Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0498 |
Symbol | |
ID | 5103659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 453201 |
End bp | 453938 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640506403 |
Product | 5-formyltetrahydrofolate cyclo-ligase |
Protein accession | YP_001190598 |
Protein GI | 146303282 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGAGGG AGGTAAAGCG GGAAATTAGG GAGAGAATCT GGAGATTAAT GGAGGAGAAG AACGTAGCTT CGTTCCCTAG ACCCGTGAGG GGGAGAATAC CCAACTTCAA GGGAAGTGCC GAGGCAGCCA GGATTCTTTC AGAGACCCAA GAGTTCAGAA ACGCGAGGGT CATCAAGTGC AACCCTGACT CTCCTCAGGC ACCCCTCAGA GAACTGGTCC TGAGATCGAG GAAGGTGTTA CTGGTCCCCA CCCCAAGGTT GAGGGGAGAG TTCTTCCTTA TGACTGAAAA GGCCTGGGAG AGTCCCAGGG AAGCCTCAAG GATTTCAAAC TTTTCCTCCT TCGGGGAAAG GGTTCACTTT AGGAACATAC CAAGGATAGA TCTAGTCGTA GTGGGTTCGG TTGCGGTTTC GCAGGATGGA GGCAGGGTAG GAAAGGGAGA AGGTTACAGT GAGCTTGAAT ATGCCATCCT CAGGGAACAG GGCTTGGTGG ATGAAAAGGT ACCAGTCGTC ACCACGGTGC ACTCTATCCA GGTTGTGGAT AGTATTCCGT TGGAGCCCTT CGATGTCCCC GTGGACATTT TTGCAACGGA AAAAGGACTC TTTAGGACTC CATCCAAACC TAAACCTCAG GGGCTCCTTC TTGAGTACTT AACCCCAGAG AAGATCCTAG ACACCCCTTA CCTCCTGGAA TATCTAAAGG AGACGGGCAG GCTTAACAAG GTTCTTCGCA GAACCTAG
|
Protein sequence | MEREVKREIR ERIWRLMEEK NVASFPRPVR GRIPNFKGSA EAARILSETQ EFRNARVIKC NPDSPQAPLR ELVLRSRKVL LVPTPRLRGE FFLMTEKAWE SPREASRISN FSSFGERVHF RNIPRIDLVV VGSVAVSQDG GRVGKGEGYS ELEYAILREQ GLVDEKVPVV TTVHSIQVVD SIPLEPFDVP VDIFATEKGL FRTPSKPKPQ GLLLEYLTPE KILDTPYLLE YLKETGRLNK VLRRT
|
| |