Gene Msed_0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0489 
Symbol 
ID5103651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp445442 
End bp445777 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content45% 
IMG OID640506395 
ProductDNA polymerase beta subunit 
Protein accessionYP_001190590 
Protein GI146303274 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACT ACCTGAGGTT AGCAAAGAAG AGACAGGAAG CCCTATCTAG GCTTAACGAC 
TTCCTGAAGC AGATAAAGGA ATTCGTGATC TCTAGGGACC CTCAAGGTAG AGTTCTACTG
TTTGGAAGCG TGGCAAGGGG AAACTCAAGG CCCGATAGCG ACATAGACGT TCTGATAATC
TCTGACGTCC TAGGGAAGGA CCTGAGAACC AAGGCTAAGA CCATGGGAGA TATAATGGAA
ATGCTAAACA ATGAATTCTT TGAGATACAC GTCGTTACAC GGGAGGAATA CGAAAACTGG
TATAAGAGGT TCATAGATGT ATGGGTTGAG ATTTAG
 
Protein sequence
MSDYLRLAKK RQEALSRLND FLKQIKEFVI SRDPQGRVLL FGSVARGNSR PDSDIDVLII 
SDVLGKDLRT KAKTMGDIME MLNNEFFEIH VVTREEYENW YKRFIDVWVE I