| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0484 |
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| Symbol | |
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| ID | 5103646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 438908 |
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| End bp | 440620 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506390 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001190585 |
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| Protein GI | 146303269 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.469347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGA GTAGAAAGTA TCAGCAAGTC CAAGAAAGAG AGGCAAAAAG ATCCCTGTTG
GTCAAGGTCC TTTACACCGA GGACTACAAG ACCTTGAGTA TAAAGCTACT GTTAGCGGCA
GTTGCGTGGC TGTTCATAGG CGGTGCGTTC GCGCTATTCC TCAGGGGACA AGCGGGGCTC
AGTAGCGAAG GCGTACCGGT AGTCCTCGAC CCATCATACT ACTTCCAGGC CATGACTAAC
CACGTCATGG ACATGGTGTT CGGTGCGGCC TTCACGGCAG TGTTCTCGCT GGCATTCTAC
ATGATCCCTG CCCTGAACGG CTCTAGGTTG GTGAAATGGC CCAAGGTAGC GAACTTCGGG
TTCTGGCTAA ACAATTTCGC CCTCTTTATG ATGAACTTGG GAGGAATACA GAACCAGTAT
CTGTTCACTT TCCTTAATCC ACTGCAGGCA TCAGTCACGT GGTACATAGG ATATGGAACC
ATGGTTGTTG CAGAATGGTT GGAGATGGCC TCGGTAATTG GTACTAGCTT CGAGGGCAGA
GTACAGGGTA AGCTAGTACC TACTCCCATT GGGTTCATTG TCATGGACAT GATAATGATG
GCCTTGGCAA ATATTCCCGT GTTTATTGCT GACATGTGGA GCTTATTCTC ACCCATAGGT
GGCCTGAACA TATACCTGTT CGGTATTCCC AACGCTGAGG TGTGGAAGGG ATTGTTCTGG
TTCGCTGACC ATCCCCTAGT GTATTTCGTT CCCTATACTC TCTCGGGATG TATAGTTGCC
ATAACTCCGC TCTACGCGAG AAGACCAATG TATAGCGTGA GGTTTACGAG ATGGCTCATC
CCAGTCCTCT TCGTGTTGGG ATCTAGCGTC TACGTTCACC ACATAGTGGA CGACCCGTGG
CCCCTGATCC TGAGGGATAT ATTCGCCCAG ACCAGCACTG CCTTGGTGGC GGTTCCCTTC
GCTGCCCTCT GGCTACTCTT CTTCATCACC CTAGGCGATC CCAGGAAGTT GAAGTGGGAT
CCAGGGTTCG CCTTCATATT TGCCGCAGCC GTCTGGAACA TAATCGGAGG AATACAGGCT
GAGCCCACCA ATCCAACACC TTCGCTGGAC CCAACGATAC ATAACACAGG ATGGATATTC
GGTCACTTCC ACATAATGCT CACTCTGTAC TCTGTGGGTG GCGTGCTGGG TGTAGTATAT
ATTGCAGGAC CCTACTTACT TGGAAAGAAC TGGTACAGCA CCAAACTAGG ATGGTTGCAC
TTCTGGGGAT GGCAAGCGGG TATGGGATTG TTCTCAGCCG TTTCGAGTGA GGGTGGATTC
TTCGGGCTAA TCAGAAGGGA AGTAGCGTGG GCCGGCTTCT ACGAGGTTTA CTACCAGCTC
ATCATGATAG CCGGTTGGCT AGCAGGCTTC GCGACCATAA TATTTGCCTA CAACCTAGTA
CTAACTCTCC TCTATGGACA AAAAACACCA AAGACCGATA TTGACTTGTG GGCTGTATAT
TCTATTGCCC TAGAGAGATA TGGGATGAGA AGGGAAGGAT ATAGCGAGGA GGAATTACCT
TTAGCACTTC CCTCAGACGG TATGATAAGG TTCGAGAAAG TATCTGAATC TGGTGGACTT
AGCACAGGTC TGTCCTCAAC GAAGGCTACC AACACGAAAC CTGAGAAGCT CTCATTGGAC
AACTCACCCG ATTCCATAGG AAACGCAAAG TAA
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| Protein sequence | MEWSRKYQQV QEREAKRSLL VKVLYTEDYK TLSIKLLLAA VAWLFIGGAF ALFLRGQAGL
SSEGVPVVLD PSYYFQAMTN HVMDMVFGAA FTAVFSLAFY MIPALNGSRL VKWPKVANFG
FWLNNFALFM MNLGGIQNQY LFTFLNPLQA SVTWYIGYGT MVVAEWLEMA SVIGTSFEGR
VQGKLVPTPI GFIVMDMIMM ALANIPVFIA DMWSLFSPIG GLNIYLFGIP NAEVWKGLFW
FADHPLVYFV PYTLSGCIVA ITPLYARRPM YSVRFTRWLI PVLFVLGSSV YVHHIVDDPW
PLILRDIFAQ TSTALVAVPF AALWLLFFIT LGDPRKLKWD PGFAFIFAAA VWNIIGGIQA
EPTNPTPSLD PTIHNTGWIF GHFHIMLTLY SVGGVLGVVY IAGPYLLGKN WYSTKLGWLH
FWGWQAGMGL FSAVSSEGGF FGLIRREVAW AGFYEVYYQL IMIAGWLAGF ATIIFAYNLV
LTLLYGQKTP KTDIDLWAVY SIALERYGMR REGYSEEELP LALPSDGMIR FEKVSESGGL
STGLSSTKAT NTKPEKLSLD NSPDSIGNAK
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