| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0462 |
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| Symbol | |
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| ID | 5105458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 416383 |
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| End bp | 417741 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506368 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001190563 |
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| Protein GI | 146303247 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.042885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTAT GGACAGATGC CATGGAACCT GAAAGATTTG GAGTTGATTC TGTAAAGGCG
GTCTCATCCC AGTTTGTGGG ATTCCTTCTC GACTCCTACG ATCTAACAAT GATTTTGAGT
ATAGCTCCCA TCTTAGCCAA GGTTCTTCTA CCTCCCGAGT CCCCCCTGCT TGCTACCTTT
AACATAATTC TGAGTTACTC CTTAACAATC ATCTTTAGAC CTCTTGGCTC AGCCATATTT
GGAAACCTTG GCGATAAGAT TGGGAGGAGA GCTGACCTAA TCATCACAGT CCTTGGCCTA
GGCTTGGTAA GTGCACTCAC TGCTGCCCTT CCCACATACT CGGAGGTGGG AATACTCTCC
TTCGTTCTTT TTGTTCTCCT CAGGGTACTG GTTGGGATTT TCGCTGGCGG CGAGTACTCC
GCGGGCCATC CCTTTGCCAT GGAGTGGACC CCTTTCAAGT GGAGAGGTTT GATAAGCGGA
TTTGTACAGG GAGGTTTTTC CTTTGGAGCT GCCCTGGCAG CTGTAGTTGA GGGAGCCTTC
GTGGGAATAT ACGGGTTAAA GGGAGTGGAG GACTTCGCAT GGAGATATGT TTTCCTTACT
GCTCTAGCAC CCGCGGTCAT CGCCCTAGCT GTGAGGCTAT CAATGAAGGA GACTCCGGTG
TTTCAGGACG TGAAGAACAG GAACATGGTC AGGAAAAGTC CGCTCACAGA TCTGTTTAGA
AAGCCCTACA GGAGGGACTT CTTTCAGGTT ATGGTGTATA TGACTGGTAT GTTCTTTTAC
GCCTATTCCC TATTTGCCTT CGTGCCAGCG ATTCTTGAAC ACGCTCCCTC GGTGTTCTCC
CTTCAAGAGG CTGAGAGCAT CTACTCCTAC GGTACTTATG CAGCCTTTGC AGGTGCAGTG
ACGTTTGGGG CCCTTTCCCA GTACCTAGGG AGGAGAAGAT TGACACTGAT TTGGGTCTTC
ATTACCTTAA TTCTCTCTGT CCCTGTATAC TATCTTCTCT TTACCTCCGC GAAGTCAGGT
AATGTGGTCG GAGCATCCTT AGCTTCCGTG TTGATAGGAA TAATAACTCA GGCTCCCTGG
GGAGTAATAC CCATCTATCT CTCTGAGAGA TTCAAGGCCT CAATGAGAGC TTCAGGTGTA
GGTTTTGGGT ATTCATCTGG AATATTTGTG GGAGGTTGGT TTAGCATATA CGTGGAACTT
ATGCACGAAT ACCTATTCAA GGGAATTGAC ACTCCAGAGA ACGTTTGGTT CTCTACAGCA
GCTTTGCTAA TCCTAGGTGC AATATTTGTG GGGATAGGAC AATACCTGGG TCCAGAAACC
CTGGGAACGA GACTAACCGA AGAACCCCAA AAGGTATAA
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| Protein sequence | MILWTDAMEP ERFGVDSVKA VSSQFVGFLL DSYDLTMILS IAPILAKVLL PPESPLLATF
NIILSYSLTI IFRPLGSAIF GNLGDKIGRR ADLIITVLGL GLVSALTAAL PTYSEVGILS
FVLFVLLRVL VGIFAGGEYS AGHPFAMEWT PFKWRGLISG FVQGGFSFGA ALAAVVEGAF
VGIYGLKGVE DFAWRYVFLT ALAPAVIALA VRLSMKETPV FQDVKNRNMV RKSPLTDLFR
KPYRRDFFQV MVYMTGMFFY AYSLFAFVPA ILEHAPSVFS LQEAESIYSY GTYAAFAGAV
TFGALSQYLG RRRLTLIWVF ITLILSVPVY YLLFTSAKSG NVVGASLASV LIGIITQAPW
GVIPIYLSER FKASMRASGV GFGYSSGIFV GGWFSIYVEL MHEYLFKGID TPENVWFSTA
ALLILGAIFV GIGQYLGPET LGTRLTEEPQ KV
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