| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0434 |
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| Symbol | |
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| ID | 5105551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 384821 |
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| End bp | 385762 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506340 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001190535 |
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| Protein GI | 146303219 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTATC TTTTAACGGG CTTAGGTTTC ATCTCGACCC ACGTAGCGTT GTATCTGAGT
GAAGTGGGCG AGGACGTTAC GGTGACGTAC AAGTCCTTGA ATCCCGTAAA GGAAGAGTAC
ATCTCTCTGC TCAAGGGGAA GGTCAAGGTG GTAAATGTTG ATCCACTCTC AGAGGAGGTG
ACAAAGTTGA TTTCTCGACA TGACATCGTC GCCAACTTCA TAGGAGAAAT TTCGGGTGGT
GAGGATAAAC TGAGATTGGC CAACGTAGAG ATTCCCAGCA GGTTAGCGAG GGATGCCTTT
GATCAGAATA AAACATTCAT CCACTTGAGC GGGGCGACCT CCACAGGAGA GACTGGGGTA
AACGTGAAGG AGGAGGCAGA GCACTGCAAG GATTCTAAGG CGTCAACGCC CTTTGAGAAG
TCCAAGTGTG AAGGTGAGAA AGAGATCATG AGGTTAGCAC TAGAGAAAGA CGGCAATCTT
GCCATATTAA GGCCCACCCT GGTGTACGGA AGATATGCAG CTCACGTTCA ATTCGTTACC
ATGTATAAGC TGGTCAAGGC TAGAGTTGTT CCTGAGCTGG GTTTAAGGAT GGCCACTGTA
AATGCATGGA CTCTTGGTAG AGCAGTTCAC ACGCTTGGAA AAGTTTCTCC CAAGAGGGTT
TACCTTTACG CCAGTGAGTG CGGAAGCGTA GCAGTCTCTA GGTTCTTTGA ACTCATGAGT
GAAGAGGTGG GTAAAGGTAT AAGGCTACCC ATTCCCACAT GGCTGGCCAA GGCTGTTTTA
CCCAAGGATA TTAGAAACCT GCTAAGATAC TCTGGTACCA CATACGACTG CTCAGCATTC
AAAGAGGTTG TAGGGGACAT GAAATTTGAC GAGGAAGAGG TTAGATCCAA CGCAAGGTTC
TTAAAGTATC TTGAAGAAAA GGATAAACTA ATCCCCACTT GA
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| Protein sequence | MKYLLTGLGF ISTHVALYLS EVGEDVTVTY KSLNPVKEEY ISLLKGKVKV VNVDPLSEEV
TKLISRHDIV ANFIGEISGG EDKLRLANVE IPSRLARDAF DQNKTFIHLS GATSTGETGV
NVKEEAEHCK DSKASTPFEK SKCEGEKEIM RLALEKDGNL AILRPTLVYG RYAAHVQFVT
MYKLVKARVV PELGLRMATV NAWTLGRAVH TLGKVSPKRV YLYASECGSV AVSRFFELMS
EEVGKGIRLP IPTWLAKAVL PKDIRNLLRY SGTTYDCSAF KEVVGDMKFD EEEVRSNARF
LKYLEEKDKL IPT
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