| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0404 |
|---|
| Symbol | |
|---|
| ID | 5105521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 355986 |
|---|
| End bp | 356720 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640506310 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190505 |
|---|
| Protein GI | 146303189 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATTG TAGTATTGGG GGCCAAAGGA GGAGTTGGGA AGTCGATGAC CACTCTCCTT
CTAGTGAGGT TCCTTCTCTC CCTGGGAAAG AAAATCATAG TTGTGGACAG GGACATGACA
GGTTACATCT CATGGTTAGC AGGAATTAAG GGAAAAGGTC TCATGGCTAG TATCATAGAT
AATGAGGAAC ATGATTACTT GAAAACGTTG AACGTGGACA AGGGAGTTCT CCACATTCTC
AAGTTTTATG GCGATGGGCC GAGACTTGTG GAGGACGTGA GGTTATTCTC GAGGGAGGAC
ATAGCTACAA AGGTGAGGGA GAAGTATAGG GAAGTTATTT CCCTTCCCCA CGATTATGTA
GTATACGATA ACAGGGGTAT GATAGAGCCT AGCGAGATCG AGTTTAGCCT TGAGATAGGG
ATGTACCTGA GTAAGTATCC GCACACCCAC TCCTACTGGG TTTACGTGTC TGATTCACTG
GAGGTAAACC TGAAAATGAC CCTTGATTAC GATGATTACC TTTGGAGTAA ATGGTCAAAG
AACCTTAACG TGAAGGGAAG ATCTTTGGTT ATTAACATGG TACCTCCAAA CTACAAGCTT
CCCAAGCTTG ATCTTACCAG ATTTAACACA GTGGTTCAAG TACCATTCAT GGAGGAACTA
TTCGAGTATT CAGGTAAGAT TGAGGATTTA CCAGTGATAA ATTCAATGAG TTCCATTGTT
TCATCCTTTA GTTGA
|
|---|
| Protein sequence | MRIVVLGAKG GVGKSMTTLL LVRFLLSLGK KIIVVDRDMT GYISWLAGIK GKGLMASIID
NEEHDYLKTL NVDKGVLHIL KFYGDGPRLV EDVRLFSRED IATKVREKYR EVISLPHDYV
VYDNRGMIEP SEIEFSLEIG MYLSKYPHTH SYWVYVSDSL EVNLKMTLDY DDYLWSKWSK
NLNVKGRSLV INMVPPNYKL PKLDLTRFNT VVQVPFMEEL FEYSGKIEDL PVINSMSSIV
SSFS
|
|---|
| |