Gene Msed_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0367 
Symbol 
ID5103610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp319141 
End bp320709 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content50% 
IMG OID640506273 
Productdelta-1-pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_001190468 
Protein GI146303152 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTTG TAAATGAGAG AACCTATCAA CGCTATTTAC AGGAGAATAG GGAGGAAGAG 
TTTCACAAGC TGGTGGACGA AGGGATAAGG AGAGTTGAGG AACAGCTAGG GCAGGAATAT
CCAATCCTCA TAGGAGACAA GGAGTTAAGG ACTCCCTCTA AGTTTAACGT TAGGTCGCCA
GTAGACACTT CTCTCACCTT AGGAGTTTTC CAGAGAGATG ATGGGGAGCT CTTGAGAAGC
GCCATAAAGT TGGCTAGGGA ATCCTATAGG GATTGGAAGG ACTCAGATTG GAGGGACAGG
GTTGAGCTCA CGGTCAAGGC TGCCAACGAG CTCAGGAGAA TGAAGTATGA GCTGGCAGCT
ACGATCACCT TTGAGAATGG TAAAAACAGA TATGAGGCCG TTGCTGAGGT TGATGAAACC
ATAGACTACT TCAACTATTA CGCTCAACTC CTTGAGGAGA ACAGGGGTTA TACCCGGGAG
ATGGAGGGCA GGATAGTCAA GGGAGAACAC GGGATCTCTG TTATGAGGCC CTACGGTCCT
TGGTTGATAA TCTCTCCCTT CAATTTCCCT CTGGCCATAA CTGCAACCAT GACCCTAGGT
GCCCTGATCA CTGGAAATAC CGTCGTAGTT AAACCTTCCT CTGACACACC GCTCTCAGCG
TATAAGCTTG TGACTACGTT GAGAAGAGCT GGCTTCTCAG CAGAGGTGGT GAACTACGTA
ACTTCTCCAG GCGAGGTGGT TTCCAAGGTC ATGGAGGAAA ACCTTGACAT AGCAGGGTTC
GCCTTCACGG GTTCAAGGGA GGTGGGACAT AGGCTTCTGA AGCAATTCAT AAGCCTGAAG
CCCAGGCCAG CCGTGTTGGA ACTCGGGGGA AAGAACGCCA CAGTCATCAC AGCGAAGGCA
GACCTAAGGA AAGCTGTTGA GGGAACATTT AGGGGAGCCT TCGGATTTGG GGGTCAGAAG
TGCAGTGCGA CCTCGAGGGT TTTCGTGGAG AGCTCAATTT ATCAGGAATT CTTGGCTAGG
TTCAAGGCTC GTACTGAGAC AGCACAGATA GGAGATCCTA GGCAGAAGTC AACGTTCCTG
GGACCCCTAA TTAACAAGGG AGCGGTGGAC AAGTTTAGAA GGTATGTGGA TCAAGCCATA
TCCGAGGGTG GCAGAGTCAT CACTGGCGGG AGAGTTAGGG AGGACACGCG AAGTTATCTG
GTGGAGCCCA CCATAATCGT GGATCTCCCC TACACCAGTT CCCTGTGGAG GACTGAACTC
TTCGTCCCCA TAGTCCTAGT GAAGGAAGTC CAAAACCTGA AGGAGGCCAT AAGGCTTGTT
AATGATGTAG ATTATGGTCT TACGGCAGGC ATATTCTCGC AGGACACGGA AGAGGTAGAG
TACTTCTTCA AGAACGTTGA GGCAGGGGTA ACTTACGCGA ATAGGGAGTC CGGTTCGACC
ACGGGTGCCA TGCCTGGAGT TCAACCCTTT GGAGGATGGA AGGATTCAGG GTGGACCGGG
AGAAATGCAG GTGGACCCTA TTACTTGCTA TCATTCATGA GGGAACAGGC TAGAACCACT
TACGATTAA
 
Protein sequence
MPFVNERTYQ RYLQENREEE FHKLVDEGIR RVEEQLGQEY PILIGDKELR TPSKFNVRSP 
VDTSLTLGVF QRDDGELLRS AIKLARESYR DWKDSDWRDR VELTVKAANE LRRMKYELAA
TITFENGKNR YEAVAEVDET IDYFNYYAQL LEENRGYTRE MEGRIVKGEH GISVMRPYGP
WLIISPFNFP LAITATMTLG ALITGNTVVV KPSSDTPLSA YKLVTTLRRA GFSAEVVNYV
TSPGEVVSKV MEENLDIAGF AFTGSREVGH RLLKQFISLK PRPAVLELGG KNATVITAKA
DLRKAVEGTF RGAFGFGGQK CSATSRVFVE SSIYQEFLAR FKARTETAQI GDPRQKSTFL
GPLINKGAVD KFRRYVDQAI SEGGRVITGG RVREDTRSYL VEPTIIVDLP YTSSLWRTEL
FVPIVLVKEV QNLKEAIRLV NDVDYGLTAG IFSQDTEEVE YFFKNVEAGV TYANRESGST
TGAMPGVQPF GGWKDSGWTG RNAGGPYYLL SFMREQARTT YD