Gene Msed_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0356 
Symbol 
ID5105514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp308642 
End bp309445 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content49% 
IMG OID640506262 
Productrhodanese domain-containing protein 
Protein accessionYP_001190457 
Protein GI146303141 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACT TGATTTCCGC ACCAAAATTA CTAGAGGACC TTCACGATTA TAAGGTGGTT 
GAGGTCACTT TCTATGACGA TTCCTACGTT GAATGGCACA TTCCCAACGC CATCAGGCTC
CCCTGGAGAT ACCTAAGGCA TCCCGTGAAA AGGGATTTCG CCACTAGGGA AATTCTTGAG
AAGAGATTAG GCGAACTTGG AATTTCCCAC GAAGATCCCT TGGTCTTGTA CAGTGACTTC
AACAATAGGT ATGCATTTTA CGCGTTCTGG ATATTGAGGG CTTTCGGCCA CAGGGAGATG
AGCGTTCTGG ATGGCGGAAA GGTCGCGTGG GAGATCAAGG AGTTTCCAAG AGAGACAGAG
GTGAGGAGTC GACCAGCCTG CAAATATGAA GCCTTGGAAC CTGACTGGAG TCAAAGGATC
ATGGTGTGGG AGTTACTTCC CAAGATCAAT AGGGGGGAGA AATTTCAGCT TCTCGACGTT
AGATACCGTG AAGAATATGT GGGAGAGGCA AGTACCCCGC CTGAACACCC CAACGAGGAA
TCTCAAGTAA CGGGTCACAT CCCCGGGGCT GTGAATGTGC CATGGAACAA GTTCTTTGAT
CCCATCACGG AAGAACTTCT TCCGCCGGAT AAGCTTGAGA TATCCGTGTC TAGGGACGAC
ACTGTGGTAT ACTGTAGAAC TGGGGCGAGG GCCTCCCTCG TATGGTTTTA CCTGAAATAC
CTTCTGAACA TTCCCCGTGT GAGACTTTAC GACGGTTCAT GGTCGGAATG GGGAAACATG
GTTGGAGTTC CAGTGGAAAG GTAG
 
Protein sequence
MKYLISAPKL LEDLHDYKVV EVTFYDDSYV EWHIPNAIRL PWRYLRHPVK RDFATREILE 
KRLGELGISH EDPLVLYSDF NNRYAFYAFW ILRAFGHREM SVLDGGKVAW EIKEFPRETE
VRSRPACKYE ALEPDWSQRI MVWELLPKIN RGEKFQLLDV RYREEYVGEA STPPEHPNEE
SQVTGHIPGA VNVPWNKFFD PITEELLPPD KLEISVSRDD TVVYCRTGAR ASLVWFYLKY
LLNIPRVRLY DGSWSEWGNM VGVPVER