| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0329 |
|---|
| Symbol | |
|---|
| ID | 5105487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 284077 |
|---|
| End bp | 286536 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640506235 |
|---|
| Product | protein kinase |
|---|
| Protein accession | YP_001190430 |
|---|
| Protein GI | 146303114 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATA TTCTATTTGT CGTCTATCTG CTTATCTTCT TCGTCATGGA TTCTCACATT
TCCGTCCAAA ACTTATTAGT TGGTCTCTCC ATTCCACTTT CATGCATACC CCTTGCCCTC
CCTAGAGCAA ATCTTTACGT TGTTCCCGTG TATTCAATTA CCCTTTTCCT CCCTCTGTTT
CTTTATCTCT CAAACTTGGA TTTGGTGGTT GCAATCCTAC TAGTTGTTTC GTCGCTTGGA
GTGCCCTTAT CCGCTGGCGA TCTAAGGAGA TTAGTTGTAG TACCCTTCAT GGCCTTCCTA
GTCATGTTTG GTATTACCTA TTCCGTTGCA GGAATTATTC TAGTTAGTTC AGGGGCATAT
TCATGGTTCC CTGTTCTAGC TGGGGTACCT CTCTTCATAT CTCCTGTCAT GAAACTGGTT
CAAAGCAAGT GGAATGTTGT GCCGGGCATT GCGTTGGTGT TTATTTCACA GTTCCTAGAG
AGTGGTCTTA ATTTCTTGGG TTTGAGCCTT ACAAGTTTCC TTTCAATATC CTCGATCTCG
GTGATACTTT GGGGAGTTTT GGCCTTTCTC GTTTCAGTTT CTTTCCTGGC TCTGGGCTTC
AAGAGATCAA TTCCTCTGAT ATTCTTGGGG CTATCGGCAT TAGTGTATCT TCTAGGTCCT
ACACAACTGG CATTTCTCCC CCTCGAGGCA GGATCAGTGA GCATAGTGAA TAGAGAGGAA
AGCAAGGAAC TAGAGGTAAG GGCTGAGGGA AACAAGATAG TTGTGAAGTT TCGTCCAAGG
GGCACGAAGA CTACTCTCCT TGTGGACTCT CTTCCCCAGA AATTCTCGTG TAACAATTCG
GAGTGCATCT CGACCATATT CACACGTCCT GGATCACATG AGGTGAAGCT CTGTTTCGCT
GGTGAGTGTA TCTCACAGAA CATCGTTACC ACTCAGCACG TAGCTTCAAC GCCCATCAAA
ATAGAGAGTA TGGTGAACGG TAATAAGTTG AATATAGTGG TGAAGGTTAC TGGTAAGGTT
AACTCGCTTG AGGTATCAGT TAATGGGGAG CCAGTGAAAC TTCAGGAGAA CGGGAGGGAA
TTCACTGGAG AGTACTTGAT TCCAGCTCCA GGGAAATATG TAGTGGAGGC AACGGCAAGT
ATCAGAAATA ACACCATTTC AGTGTCAAGG GAGGTTGAAG TCAAGTCCCT AAATCTAGAA
ATCAATCTTA AGGTTGATCA AAGATGGCCT GATTTGATTA TTACAGCTGA AACTATTGTG
GACGGTTCTA AATCCCCTGT AGATAAGATA AGGATAAGGG TAAATGACGA AGATCTCTCC
TTCAATAACC CAGAGGCTGG AGTTTACACC GCGACGGTTA CATCCCTAGA AGGGAAGACC
TATGAGGTGG TAGTCGAGGC TCAAAAGGGC GAGATAACTA GGGTAGAGAG AAGGAAAGTG
ACCATATCTC CGCCTCTTCT CAGCTCCTGG GATCCCAAGA TCTGGATAGG GAGGACTATC
TACGGTTACG ACGTGGAGAG CATTCTAGGC ATTGGGGGAA CCTCGTATGT GCTTCTAGGG
AGGAGGGAGA ACAAGAAGTA TGCAATAAAG ATAGCCAACG TTTCTCCTTC ATCCTCAAGT
TCCTCAACTA GGCTAGGAAT CTCTACGTTC TCTGACCTCA GTAAGGAATC GTCAAAACTC
CAGGAGATAT CTGAGCGCTC CAATGACATC GTTAAACTGT ATGGGGTCTA CGCTGACGTT
AATACCATCA GGGAGATCCT GGAGGGAAAG TCCTTCCTAT ACCTTACCAA TCCCCCTGCT
ATAGTCATGG AGCTAATGAC CGGCGGGACA GCGGAGGACC TAGTGAAGAA GGAGGCAGTG
TTTCTCTCAT CCAATTGGCC CTCCGTGGTA AGGATTATCT TCATGAGTAC AGCGAGGGCA
CTCTCAGTGG TTCACAGGGA GAACTACGTT CACCTAGACG TTAAGCCCAG GAATATCTTT
TTCAGTGAAC CGCCAGGGAA CACTGGTGGA GAAGTTCTGA ACAATCTGGT TAACGGGAAG
ACTGCGGTAA AGCTTGGGGA CCTGGGTTCT GCTAGGAGGA GAGGAGAGAG GATCACCGAA
TATACAGCCG AGTACTGCCC TGTGGATCAA GTTGAGGACA TGTTATTGGG AAGAGGTGCC
AGGCCAGACA TGGACGTTTT CGCGCTTGGG GCAACAATTT ACAGGTTAAT AAACGGGACT
TCACTTAATC CGCCAGAGGT GGTCAGGGAA ATGGACGGAG CTGTAGACGC TTTTCTGAGG
AGGGGTGACT TTAGGGCTAA CCTAGATAGG GCGAGGAGGG CATATTCTGC AGTCCATTCT
AGTTTAAGAT TGAGCAGGTT CCATGAAGTC GAAGGTCTGG TGAAGAAAAT GACGGATCCT
GATCCGACAA GGAGACCCTC CATACAGGAG GTCCTTAACG AGTTAAATGC GATAAAGTGA
|
|---|
| Protein sequence | MIYILFVVYL LIFFVMDSHI SVQNLLVGLS IPLSCIPLAL PRANLYVVPV YSITLFLPLF
LYLSNLDLVV AILLVVSSLG VPLSAGDLRR LVVVPFMAFL VMFGITYSVA GIILVSSGAY
SWFPVLAGVP LFISPVMKLV QSKWNVVPGI ALVFISQFLE SGLNFLGLSL TSFLSISSIS
VILWGVLAFL VSVSFLALGF KRSIPLIFLG LSALVYLLGP TQLAFLPLEA GSVSIVNREE
SKELEVRAEG NKIVVKFRPR GTKTTLLVDS LPQKFSCNNS ECISTIFTRP GSHEVKLCFA
GECISQNIVT TQHVASTPIK IESMVNGNKL NIVVKVTGKV NSLEVSVNGE PVKLQENGRE
FTGEYLIPAP GKYVVEATAS IRNNTISVSR EVEVKSLNLE INLKVDQRWP DLIITAETIV
DGSKSPVDKI RIRVNDEDLS FNNPEAGVYT ATVTSLEGKT YEVVVEAQKG EITRVERRKV
TISPPLLSSW DPKIWIGRTI YGYDVESILG IGGTSYVLLG RRENKKYAIK IANVSPSSSS
SSTRLGISTF SDLSKESSKL QEISERSNDI VKLYGVYADV NTIREILEGK SFLYLTNPPA
IVMELMTGGT AEDLVKKEAV FLSSNWPSVV RIIFMSTARA LSVVHRENYV HLDVKPRNIF
FSEPPGNTGG EVLNNLVNGK TAVKLGDLGS ARRRGERITE YTAEYCPVDQ VEDMLLGRGA
RPDMDVFALG ATIYRLINGT SLNPPEVVRE MDGAVDAFLR RGDFRANLDR ARRAYSAVHS
SLRLSRFHEV EGLVKKMTDP DPTRRPSIQE VLNELNAIK
|
|---|
| |