| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0324 |
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| Symbol | |
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| ID | 5105482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 279165 |
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| End bp | 281570 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506230 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001190425 |
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| Protein GI | 146303109 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGT TAGGCAGAAT TAAGGAAATT CTTAAGATAG CCCTAACCAC TACAAGTGCC
CACGACATAG GAATCATGTA CATTGTGCTA GGTATAATAA GTCTTATCAC AGGTTCCGCT
TACGCAGCGC TGATCAGGGA TCAACTAACG TTGAATAACG TGGGTGCGGT TGACTACTAT
AATGCCGTGT CTCTACACGG CATATTTATG ATCTTCTTCA TGGTGATGCC GATCTCGACT
GGTTTCGCTA ACTACCTAGT TCCTAGAATG ATTGGTGCGC ACGATCTGTA CTGGCCCAAG
ATAAATGCCC TGTCCTTCTG GATACTGGTA CCGGCAGTCT TCATGAGCAT AATTGCGCCC
CTGTTCGGGC CTATAAACAC TGGATGGTAC ATGTATGCGC CTCTAAGCAC AGACCTTCAG
GTAAACGGGG GTTTCGGCGT TACTCTCGTT GAGGTAGCGT TAATGATAGC GGGGGTATCT
TCTACTCTTA CGGGGATAAA TTTCCTCATG ACAATCCTTA GACTGAGGAA AATCCCCTTC
TTCAAGATGT CTCTTTTCAC TTGGTCATGG TTTGCGACCT CTATTCTTCT AATGGTAGCC
CTGCCACCCT TAACAGCAGG TCTAGTCATG GCGTTTCTGG AGAGGATGTG GAACCTTCCG
TTCTTCAATG CTGCCCTTGG TGGAAACCCG CTCCTGTGGC AGAACGTATT CTGGTTCTTC
GGACACCCAG AGGTATATAT TCTCATTTTG CCGGCCATGG GGCTGGTCGG TGAGGTTCTT
CCAAGGGCCG TGGGAAGACA GATTTACGGA TATAAGGCGT TAGCCCTATC GTCAATGGCA
ATAGCCTTCC TGTCAGTTCT GGGAGTTTGG ATGCATCATA TGTTCACGGC AATAGATAGT
GATGTGGTAA GGGAAATAGC TGCGGCAACG ACCATGGCCA TTGCCATACC CTCTGGAGTA
AAGGTGGTGA ACTGGACTAT TACCTTCTAT GGAGGGAAAG TTAGGTTCTC AGCCCTAACC
ATAGGAATGA TAGGTTTCAT CACGCTGTTC CTGGTGGGTG GAATCACAGG AGTCTTCTTC
CCGCTTATAC CTGTGGACCT AGCCTTCAAT GGTACCTATC TAGTAGTGGG ACATTTCCAT
TACATGGTCT TTGCCATACT CGTGGGTTTG TTAAGCGGTT TGCTCTACTA TTTCCCCTAC
TTCACTGGGA AGTGGTTTGA TCAGGAACTG GCCAGGACCT CAATGTTCAT GATAGTTGTT
GGGGCTTTCG TTGTAGCCAC GGGAATGAGT ATTGACGGAG TCTTGGGCAT GCCCAGGAGA
TACGCCGTGG TGCCGGCCCC TGTCTATCAG CCCTTCCAGA ATCTAGTCAC GGTAGGAGGT
TTCGTGGAGG GGATTGGTCT ACTGCTAGCC TTCGGGACTC TACTCTACGC CTGGGTTAGG
GGGCCCCCTG TTAAGAACCT GGATCCCTGG AATTCAGAAC AGCTCATAGG GATACCAGAC
TTCACGCTCA GGCCCATTGC CCTACCGCTA TCCTTTGGGA AGGAGATGGA TGGCACAACC
CCTGAGCATA GGCATGGCTC CTATTTCCCT TCACTGTTGG GGTTGCTGTT GTGCTTCCCA
CCACTGGGCT TCATGTTAAT CCTAGCAGGT ATAACTATCC CCGGAATTTT CATGGTTTTA
GCCTTCATAG GAGTGGGAAT GGCTTGGCTA TATAACGACT ACTTCAGGCA AATTAAGCCA
ATGCCAGGGC TTGGGGGTTT CGGACTAACC AAGATGTTGA GCTCAACGCC AACAGGGTCC
ACTGGTGCCC TGGGAGGGGT TGAGAACCCA ACGATCCAGG AGAACGGGGT CGAGATCGCC
AGGAGGGCGA AGACGCCTGT CCTCTTCTTC ATCATAGCTG AGATATTCCT ATTTGGAAGC
TTCATAGGCG GTTACATCTA TGACGTGAAC GAGACTCCGA CGGTGGCTAG CCTACCAAGG
TTACCTGTAG ATTGGTATCC TCTTCCCCTG ATCATGACGG TGGTTCTATT ATCAAGTTCG
ATTCCAGCTC ATCTCGCGTA TCATAACTTC CTAAAGGGTA GGATCAAGAT GTTCAAGATA
CTGGGTGCAT TGACTACCCT GATGGGATTC TCGTTCCTAA TGGGACAGGT ATACGAGTTC
ACGCATATAG TCAAGTTCAC TCCACAACAG GACGTATACT CAGCATTCTT CTTCAGCATA
GTGTCACTCC ACGCATTTCA CGTTATAATG GGGCTAGTTC TCTGGACAAT TACCCTACTT
AGGACCAGGA TCACCATCCC ATACCAGCTA TCCACAGGGG CATCCTACTA CTGGCACTTC
GTTGACGCTG TATGGGTGGT CGTATTCACT ATGCTTTACT TGCAACTACC AATCTATCAC
CCGTGA
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| Protein sequence | MGKLGRIKEI LKIALTTTSA HDIGIMYIVL GIISLITGSA YAALIRDQLT LNNVGAVDYY
NAVSLHGIFM IFFMVMPIST GFANYLVPRM IGAHDLYWPK INALSFWILV PAVFMSIIAP
LFGPINTGWY MYAPLSTDLQ VNGGFGVTLV EVALMIAGVS STLTGINFLM TILRLRKIPF
FKMSLFTWSW FATSILLMVA LPPLTAGLVM AFLERMWNLP FFNAALGGNP LLWQNVFWFF
GHPEVYILIL PAMGLVGEVL PRAVGRQIYG YKALALSSMA IAFLSVLGVW MHHMFTAIDS
DVVREIAAAT TMAIAIPSGV KVVNWTITFY GGKVRFSALT IGMIGFITLF LVGGITGVFF
PLIPVDLAFN GTYLVVGHFH YMVFAILVGL LSGLLYYFPY FTGKWFDQEL ARTSMFMIVV
GAFVVATGMS IDGVLGMPRR YAVVPAPVYQ PFQNLVTVGG FVEGIGLLLA FGTLLYAWVR
GPPVKNLDPW NSEQLIGIPD FTLRPIALPL SFGKEMDGTT PEHRHGSYFP SLLGLLLCFP
PLGFMLILAG ITIPGIFMVL AFIGVGMAWL YNDYFRQIKP MPGLGGFGLT KMLSSTPTGS
TGALGGVENP TIQENGVEIA RRAKTPVLFF IIAEIFLFGS FIGGYIYDVN ETPTVASLPR
LPVDWYPLPL IMTVVLLSSS IPAHLAYHNF LKGRIKMFKI LGALTTLMGF SFLMGQVYEF
THIVKFTPQQ DVYSAFFFSI VSLHAFHVIM GLVLWTITLL RTRITIPYQL STGASYYWHF
VDAVWVVVFT MLYLQLPIYH P
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