| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0303 |
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| Symbol | |
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| ID | 5104939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 261031 |
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| End bp | 262002 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640506209 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190404 |
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| Protein GI | 146303088 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.667195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTAATCG CTGAACCTTT TTCATTTTCT AAGTCATCTT TCAAGGGAAA ATTAATCAAT
TGTTCATCTC TAAATACTCA AAAGCTTATA GGGAATAAAG TCGTAATATT GAATGTGTTA
GTCACTGAGA TAGCCTCCAT ACCTCTTTTC CTACTGGGCG TGGAGCTCAT CTACAGGGGG
GCAAAGTTCT CTAGTCCTTA CGTGATCGCC CTAATTTCAA TTTTACCAGA GTTGATAATA
ACCTTGGAAG CGTCGTTCAG GTCAAACTAT TACGTGGCGC TCTCAACTGT ACTGGGGAGC
GTTATCTCCC TCTACGTAAT TGGGGTTGCG TTCTTTGGAG TGGTCCATTT CATTAGATGG
AAGAGCGACT TCAACGTAGG AATTCAGAGG GAATACCTCT TCATAGTTGT CGCCTCCCTC
TTCATAGGTC TCATGGGTCT CACGGGTAGA ATAGATGTTT GGTGGGGAGT TGTCCTATTT
GGTTTATTCC TGGCATATAG CGTAATGAAA GTGAACAGGA GGGTAGTTAG GGATTCTAAG
GCAATTCCAG CCCTACTTGT CGGTAGTGTT ATAGTCTGGA TATCCTCATC CTGGCTTCTT
CAAGACATCT TCTCGTTATC AGCAATGTTT CACGTGCCTC CGTATTATGT TGCCATACTC
ATAGTTCCCG TTATGTCCAA CCTACAGGAA ATCTCAACTG CCCTCAGATC AAGGAAGGAG
AACGTGATGA GGGACCTGCT CCTTGGAGTG ATAAATGAGA ATCTTATGGC TTCCAGCTTG
CTCCTTGCCA TAATAGGGTT TGCGTCAGGG GTAAGCGGGA TAGCCCTAGA CTCTTTAACA
CCTCTTATTG AGGTCTCTTT CTTAGCGGGG ATCCTAGCAT ATTTCCTAAT AAAGAATGGC
CAAATCAAGC TCTACGATTC AATACTAATG ATGTTAGGCG TGTTGGTATT CATTGGGATG
TTCAGACTGT GA
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| Protein sequence | MLIAEPFSFS KSSFKGKLIN CSSLNTQKLI GNKVVILNVL VTEIASIPLF LLGVELIYRG
AKFSSPYVIA LISILPELII TLEASFRSNY YVALSTVLGS VISLYVIGVA FFGVVHFIRW
KSDFNVGIQR EYLFIVVASL FIGLMGLTGR IDVWWGVVLF GLFLAYSVMK VNRRVVRDSK
AIPALLVGSV IVWISSSWLL QDIFSLSAMF HVPPYYVAIL IVPVMSNLQE ISTALRSRKE
NVMRDLLLGV INENLMASSL LLAIIGFASG VSGIALDSLT PLIEVSFLAG ILAYFLIKNG
QIKLYDSILM MLGVLVFIGM FRL
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