| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0291 |
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| Symbol | |
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| ID | 5104927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 247618 |
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| End bp | 249306 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506197 |
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| Product | cytochrome b/b6 domain-containing protein |
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| Protein accession | YP_001190392 |
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| Protein GI | 146303076 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0120651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.455263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAA CTTCACAGGA AAAAAAGAAG GGTCTAATAG ATCAAATTCT TGATAGGGTA
GGGGTAACTG AGGCTCCGTT CTTTAAGACC CCCGACTACA TGTATAACAT TTCCTACTGG
CTTGGTGCCA TGGTCTCAGC TGCTTTTATC TACACTGTAA TCACCGGGCT CTTCCTTTTA
CTTTACTATA TGCCAGCTAA TCCTTACCCT CAGACACAGG CGATAATTAA TACTGTGCCC
TATGGGTCGG TCATCCTTTT CAGTCACCTT TATGGAGCTT ACATCATGAT CATCCTAGCG
TATATCCACA TGTTTAGGAA TTTCTATAAG GGAGCTTATA AAAAGCCTAG GGAACTGCAA
TGGGTAACTG GAGTTTTGTT ACTCGCTCTG ACCATGGGTG CTTCATTCTT TGGCTATAGC
CTCGTGAGCG ACGTACTGGG AGTCAATGCA ATAAACATCG GGGAAAGCCT TCTTGTGGGA
ACTGGGTTCC CAGGTGCTTC CACTATTGCA AATTGGCTAT TTGGACCCGG AGGTGACGCA
GCTACAGCCA GTAACCCACT GGTTAAATCG CAGCTATTTG ATAGGCTTCT TGGCTGGCAC
ATCATCATGG TGTTCCTGAT AGGCCTTCTA TTTGGTGTTC ACTTCCTCAT GTCAGAGAGA
TACGGTATGA CTCCCTCTGC TAAGGAAAAG CCCAAGGTTC CAGCATATTA CACAAAGGAG
GAGTGGTCTA AGTTCAACGA GTGGTGGCCC AGGAACGTGG TTTACATGCT ATCAATCGTG
CTGATGACCT GGGGAATTAT CCTGTTTATC CCAGATCTAC TAGCTAACAT CAACGGCCTA
CCCATTGTGA TCAATCCTTA CCCTGCACCT GAACCCGGGA CCGCAGCAGC TCTTTCCACA
CAACCCTACC CACCTTGGTT CTTCCTATTT CTATACAAGT TTGTGGACTT TGAGCTTCCC
AATGGACAGG CCATGAGTCC AGCTCAGGCA CTTTCAATAC TAGTGGTTAT TCTAATGGTG
CTGATTCTAA TGCCCTTCTT TGAGAACAGC GAATACATGT TCCTAAGGAA CAGGAAGTTC
TGGACGTGGA TAATGACCGT AGCGTGGGTG TCCCTCATAG AGTTAAGCGT ATGGGGATAC
CTAGCTCCAG GAGTTCCAGC TCCAACTAGC CAACAGGTGG AGATTCTCGG AATCCCAGCG
GTAATAATAG GTCTTGTTAT TCTTGCTACA GGTAGACAAA AAAGCTCAAA GTCAGCACCT
TCTCTTAATG CACCAGAAAC TGTTCCAAAA ATTGGACCAA CATCAATCCT TGGAACTGCA
ATAGCCTCGC TACTGTTCGC CGGCAGTTTC GGAGTTTGGT TAATGCACCC TGTCATGATT
AACATGATAA TGATGATACC CTTTGGGGCA TTAGCTGTTT ACATGGTGTA TAGGATGGCC
TCTGGAATGA GGGTTAAAGT TGCCAAGCCC GCGGGTACAA TGACATGGGA GGAGGTTAAG
TTTAGGAAAA CAATTGCCTT GTTTGCCCTT CCAGCAATTC TAGTGGTAAC AGCTATACAG
ACTGCAATAA TGTGGAAACT TCCAAGTGTG GGACCACAGG CTACCTACGC TGGAATGGAT
CTAGGTATAC TCCTGTTCCT ATGGGGTGTG GCCATCCAGC TTTATCATTA CATAGTTTAT
GTTAGGTGA
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| Protein sequence | MTETSQEKKK GLIDQILDRV GVTEAPFFKT PDYMYNISYW LGAMVSAAFI YTVITGLFLL
LYYMPANPYP QTQAIINTVP YGSVILFSHL YGAYIMIILA YIHMFRNFYK GAYKKPRELQ
WVTGVLLLAL TMGASFFGYS LVSDVLGVNA INIGESLLVG TGFPGASTIA NWLFGPGGDA
ATASNPLVKS QLFDRLLGWH IIMVFLIGLL FGVHFLMSER YGMTPSAKEK PKVPAYYTKE
EWSKFNEWWP RNVVYMLSIV LMTWGIILFI PDLLANINGL PIVINPYPAP EPGTAAALST
QPYPPWFFLF LYKFVDFELP NGQAMSPAQA LSILVVILMV LILMPFFENS EYMFLRNRKF
WTWIMTVAWV SLIELSVWGY LAPGVPAPTS QQVEILGIPA VIIGLVILAT GRQKSSKSAP
SLNAPETVPK IGPTSILGTA IASLLFAGSF GVWLMHPVMI NMIMMIPFGA LAVYMVYRMA
SGMRVKVAKP AGTMTWEEVK FRKTIALFAL PAILVVTAIQ TAIMWKLPSV GPQATYAGMD
LGILLFLWGV AIQLYHYIVY VR
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