| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0275 |
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| Symbol | |
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| ID | 5103895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 232982 |
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| End bp | 234235 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506181 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001190376 |
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| Protein GI | 146303060 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0862859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTAG CTTCAAGGAT AATAGAAGAG GATTCAAGGT ATCTAATGCA GTCCTTCAGC
AGATGGTATC CCCTGGTGAT TGAACGTGCC AAGGGATCCC TAGTGTATGA CGTGGATGGA
AAGGAGTACA TTGACATGAA TGCAGGCATA GGGGTAATGG CCCTGGGACA CGGCAACGAG
AAGATCATCC GCGCCGTTCA AGAGCAGATG AACAAGTTTT TCCACTATAG CCTAACCGAC
TTCTATTACG ACCTAGCTGT AAGGGTAGCC CGCAAGCTGG TATCACTCGT GGGATTTCAG
GGTAAGGTGT TTTACGCCAA CAGTGGCACG GAGAGTGTGG AAGCCAGCCT GAAGATAGCC
AGGGGTCACA CTGGGAGGCA GTACATCATA GGTTTCACTA ACTCATTTCA CGGAAGAACA
TTCGGATCCA TGTCCTTCAC CTCAAGTAAA TCGGTGCAAA GATCTGCGTT CTCACCACTT
TTACCCTCCA CTCTCCTGGT TCCATACCCT GACAGACATA ACCCGCTTTG CCGAGAGGAT
TGCGCCAACG CAGTTCTGGA ATACATTGAG GATTGGGTCC TGAAGAAGAT CGTGGACCCC
AACGACGTTG CGGGTTTCCT CCTGGAACCT ATTCAGGGGG AGGGAGGAAT CATCGTCCCC
CCAAGGGAGT TCCTTCAAGG TCTCCAGAGG ATAGCGAGGA AGAACGGGAT TCTCCTCATC
CTAGATGAGG TCCAGACTGG AATAGGCAGG ACAGGAAAGA TGTTTGCCTT TGAGCATTTT
GGTGTGGAGC CGGATCTGAT ATGTCTGGCC AAGGCCCTTG GGGGAGGCTT ACCCTTGGGG
GCAGTGGTGG GGAGGAGTGA GGTCATGGAC CTCCCAAGAG GTTCCCATGC CAACACGTTC
GGGGGAAATG CCCTAGCCCT GGCCGCGGCC GAGGTCGTGC TAGAGGAGGT TCCAGGGCTT
CTAGGAAGGG TTAACTCCCT GGGTAAAATG ATCGTGGACA TTCTAGGCTC CACGAAGTCC
AGATACGTGG AGGAGATTAG GGGTATGGGT CTCATGATAG GAGTAGACCT AAGGAGAGAT
GGGGAACCCT ATGAGGAGGG GCTCGAGAAG GTTCTGAGGA GATCCTTCGA AAGAGGAGTA
CTCGCCATAG GAGCAGGTGA ATCAGTAGTG AGATTACTTC CTCCCCTCGT GATAGAGGAA
GAACTTGCTC AGAGGGGTAG CTCTATAATA AGGGAGGAAA TAGATAGGTT ATAG
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| Protein sequence | MSLASRIIEE DSRYLMQSFS RWYPLVIERA KGSLVYDVDG KEYIDMNAGI GVMALGHGNE
KIIRAVQEQM NKFFHYSLTD FYYDLAVRVA RKLVSLVGFQ GKVFYANSGT ESVEASLKIA
RGHTGRQYII GFTNSFHGRT FGSMSFTSSK SVQRSAFSPL LPSTLLVPYP DRHNPLCRED
CANAVLEYIE DWVLKKIVDP NDVAGFLLEP IQGEGGIIVP PREFLQGLQR IARKNGILLI
LDEVQTGIGR TGKMFAFEHF GVEPDLICLA KALGGGLPLG AVVGRSEVMD LPRGSHANTF
GGNALALAAA EVVLEEVPGL LGRVNSLGKM IVDILGSTKS RYVEEIRGMG LMIGVDLRRD
GEPYEEGLEK VLRRSFERGV LAIGAGESVV RLLPPLVIEE ELAQRGSSII REEIDRL
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