Gene Msed_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0265 
Symbol 
ID5103885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp223929 
End bp224264 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content42% 
IMG OID640506171 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001190366 
Protein GI146303050 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00635025 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.325102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCA TTTCACGTGA TGAACAAAAT AAAACTACAT GCCCTATCGT GGAGACAATA 
AAGATTATAG GGACGGAAGC TAGACTACTG GTTCTGAGAT ACCTCTTTGA TGGTCCAAAG
GGATTCAATC AACTCCTGAG GGAAACTGGA CTCAGTTCAA AGACCCTTTC CTCTACGCTC
AAGTTTATGG AGGAGGCAGG AATAGTCGAG AGAAGAATTG TGGGGACTAG ACCCTTCAAG
GTGGAATATG CTCTAACCAG TAAGGGTAAA GAACTAGAGA GTATTTTCAA GTTAATGGGG
CAATGGGGAG AGAAGTGGGT ATTGAATAAA AATTAA
 
Protein sequence
MASISRDEQN KTTCPIVETI KIIGTEARLL VLRYLFDGPK GFNQLLRETG LSSKTLSSTL 
KFMEEAGIVE RRIVGTRPFK VEYALTSKGK ELESIFKLMG QWGEKWVLNK N