Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0265 |
Symbol | |
ID | 5103885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 223929 |
End bp | 224264 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640506171 |
Product | HxlR family transcriptional regulator |
Protein accession | YP_001190366 |
Protein GI | 146303050 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00635025 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.325102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCCA TTTCACGTGA TGAACAAAAT AAAACTACAT GCCCTATCGT GGAGACAATA AAGATTATAG GGACGGAAGC TAGACTACTG GTTCTGAGAT ACCTCTTTGA TGGTCCAAAG GGATTCAATC AACTCCTGAG GGAAACTGGA CTCAGTTCAA AGACCCTTTC CTCTACGCTC AAGTTTATGG AGGAGGCAGG AATAGTCGAG AGAAGAATTG TGGGGACTAG ACCCTTCAAG GTGGAATATG CTCTAACCAG TAAGGGTAAA GAACTAGAGA GTATTTTCAA GTTAATGGGG CAATGGGGAG AGAAGTGGGT ATTGAATAAA AATTAA
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Protein sequence | MASISRDEQN KTTCPIVETI KIIGTEARLL VLRYLFDGPK GFNQLLRETG LSSKTLSSTL KFMEEAGIVE RRIVGTRPFK VEYALTSKGK ELESIFKLMG QWGEKWVLNK N
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