| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0221 |
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| Symbol | |
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| ID | 5104087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 182314 |
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| End bp | 183693 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506126 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190322 |
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| Protein GI | 146303006 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000130576 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0122393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTCA GGAGTAAGAG ACACAACAGG GTCAGGGCAC CGTTTGATTG CGAGAGAGGG
TTGCCCTATA CAGAGGTAAA CGTGAACGGG AAAATTGTGG AGAACTGTGA GCCTCCTACA
AGACTTCATG GGCTTAGCTT TCCCTTAAGC GGGATGTATC TACATCGAGT CAAACTTCTG
AGAACCTTTC CCTGGCTCCT GGAAAAGGTA GCAGAACGGA TGAATGTTCC AGAAGGATAC
TCCACCGTGG AGGATTACAG GGTTGAGAGG GTTAGCGTGG ATACGCTAAT AGTAGGATCA
GGACTTTCAG GTTTAACAGC TCTATCCAAG AGTAAGGCCA TGCTTGTCAC GAATGATCTT
TACACAGACC TCTTTGACGA TCCCTTGAAT CAGGGAGAGC TTTTGGGGAA GGTCAAGGAC
ATTATCAAGC AGAACGAGGG TAGGATAATT CAGGGCGACT TCCTAGGAAA GTTTACTGAG
GGCTTTGTGG TCAGAACGGG TAAGAAACTC GTTCTAGTTT CCCCCTCCAG GGTGATCTTC
GCCGTTGGTG GAAGATATTT GCCTCCTATC TTCGAGGGTA ATGACTATCC CAACGTGATT
TCCAGGAGAC TTTATCTCAA GAGGAGATCT GCCTATAGAA GGATAGTGGT TCTTGGATCT
TCGGATGATG CAATTAAAAC TAGTCTAATT TCAGGAGGTA AAATTCTGAC TCCGCGTGGG
GTAAGGCTCT TCTCAAGAAG GTACTTGGAG TTGGCCGAAA CTAGGGGGGT GGAGATAGAG
GAGGTCGACT CTCTTAAGGT GAAACCAAGG GATGGCAAAC TTTTCGTGGA GTGGAATAGT
AGTAATCTTC TGGTTGACGC TGTGGTTTTC GCTCCAGTTA AACAGCCCAG ACTGGAACCC
ATAGCTAATG CAGGGTGTGA ATACAGGTTT TACCCAAACA TGGGACTATA CGTTCCGGAA
CATGAGATGG ACGGTTACAT GAGGAGTTGT GGGCACTTTG TAGTTGGAGG GGCCAGAGGC
ATCATGGACG AAGAAACGTC GATGTTAAGT GCTGAGGCTC CTTTTAGCGC TGAGGCCCTC
TCTACCCTAG CCAGTCATCT GAAAGAAACT CCCCTTCACG AGTACTACAC AAGGAATTTC
GTATCTGTGA AGAGTCCATA TTACTATTCT CCAGGAGGTT ACGCTTGTTT CTGCGAAGAT
GTGCTCTGGA GTGATGTGGA ACAGGTCATG AAAATGGGTT ACGACAATGT GGAGTTAATC
AAAAGGGTTG GTGGGATTGG TCTTGGCGAG TGTCAGGGCA AGGTTTGCAC ATACGTTACT
GGTAGTATCC TGTCAAGTCA GAGGCTGATA ACCTTCAGAT CACCGCTTTA CCCGATGTGA
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| Protein sequence | MEVRSKRHNR VRAPFDCERG LPYTEVNVNG KIVENCEPPT RLHGLSFPLS GMYLHRVKLL
RTFPWLLEKV AERMNVPEGY STVEDYRVER VSVDTLIVGS GLSGLTALSK SKAMLVTNDL
YTDLFDDPLN QGELLGKVKD IIKQNEGRII QGDFLGKFTE GFVVRTGKKL VLVSPSRVIF
AVGGRYLPPI FEGNDYPNVI SRRLYLKRRS AYRRIVVLGS SDDAIKTSLI SGGKILTPRG
VRLFSRRYLE LAETRGVEIE EVDSLKVKPR DGKLFVEWNS SNLLVDAVVF APVKQPRLEP
IANAGCEYRF YPNMGLYVPE HEMDGYMRSC GHFVVGGARG IMDEETSMLS AEAPFSAEAL
STLASHLKET PLHEYYTRNF VSVKSPYYYS PGGYACFCED VLWSDVEQVM KMGYDNVELI
KRVGGIGLGE CQGKVCTYVT GSILSSQRLI TFRSPLYPM
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