| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0216 |
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| Symbol | |
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| ID | 5104082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 177695 |
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| End bp | 178948 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506121 |
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| Product | glutamate-1-semialdehyde aminotransferase |
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| Protein accession | YP_001190317 |
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| Protein GI | 146303001 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
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| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000686637 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0344059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCAGTG ATTTGTGGAA TAAGGCTCAA GCTGTCTTTG CAGGTGGAGT AAATAGCCCA
GTAAGGGCTG CGGTAAAGCC ATTTCCCTTC TATACTAGAT CTGCTAAGGG CGCATACCTA
GTTACAGAGG ATTCAAGGAG ACTCATTGAT TTCGTTTTGG GATATGGTCC CCTGATTCTT
GGTCACGCCC ACCCCAAGGT AATCGAGGCA GTGAAGGACC AGTTAGAGAG GGGATGGTTA
TACGGAACCC CCAGCAGGGC GGAGGTTGAG CTTGCCTCCA TGATTACCAA GCATGTACCA
TCTGCCCAGA AGGTCAGATT CGTGAATAGT GGCACAGAAG CTACCATGAC CGCACTCAGG
TTAAGCAGGG GATTCACTGG TAGGAGTAAG ATACTCAAGT TCGACGGTAA TTATCACGGG
GCCCACGATT ACGTTCTCAT CGACGCGGGA AGCGCAGCTT CGGAGTTCGG AGTTCCCTTC
TCTCAGGGAA TACCCACGGA GGTCTCATCC ACCGTGTTGG TTTGCCCCTA CAATGACTTG
ACCTGCGTGG AGACGGTATT GAAGAGGGAG GAGATAGCTG GGGTAATAGT GGAGCCTGTG
ATGGGAAACA TGGGAGTTAT TCCACCTGAG AAGGATTTCT TACCAGGTTT GAGGAAGCTC
ACCAGAGAAT ACGGGTCAGT GCTAATTTTC GACGAAGTGA TTACGGGCTT CAGGTTAGGA
TTAGGTGGCG CGCAATCCTA TTTTGGGGTG ACGCCCGACC TGACAACCTT GGGTAAGATA
ATAGGCGGAG GTTTCCCCAT AGGTGCAGTT TGCGGTAGGA AAGAGATAAT GGACCAGCTC
ACCCCCTCTG GAAGAGTGTT CAACGCTGGA ACCTTTAATG CAAACCCAAT TTCCATGACA
GCCGGGATAG CCACAATACA AGAACTTGAG AAAAAGGAGG TGTACACGGT GAGCGAGAGG
GCTGCAAGGG TCTTGGCTGA GGAGATAGAT CGGGCCATAA AGATGGACCA CGTCGTGAAC
AGGGTCTACA ACTTTTTCCA GTTCTTCCTT GGGGTGAAGG ATGTCAGAAA CGCTAATGAT
GCTCGTAAGG CAAAGAGGGA TCTTTACGTT AAAGTTCACG AGAGTTTACT GAAGGAGGGG
GTATTCATCC CTCCAAGTCA GTTTGAGGCC CTCTTTACCT CAGGAGCTCA TGATGACGAC
GTGGTGAATG AAAGTGCTAG GGTCTTCAAG AAGGTACTGG AGGATCTAAC GTGA
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| Protein sequence | MSSDLWNKAQ AVFAGGVNSP VRAAVKPFPF YTRSAKGAYL VTEDSRRLID FVLGYGPLIL
GHAHPKVIEA VKDQLERGWL YGTPSRAEVE LASMITKHVP SAQKVRFVNS GTEATMTALR
LSRGFTGRSK ILKFDGNYHG AHDYVLIDAG SAASEFGVPF SQGIPTEVSS TVLVCPYNDL
TCVETVLKRE EIAGVIVEPV MGNMGVIPPE KDFLPGLRKL TREYGSVLIF DEVITGFRLG
LGGAQSYFGV TPDLTTLGKI IGGGFPIGAV CGRKEIMDQL TPSGRVFNAG TFNANPISMT
AGIATIQELE KKEVYTVSER AARVLAEEID RAIKMDHVVN RVYNFFQFFL GVKDVRNAND
ARKAKRDLYV KVHESLLKEG VFIPPSQFEA LFTSGAHDDD VVNESARVFK KVLEDLT
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