| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0190 |
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| Symbol | |
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| ID | 5103934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 153774 |
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| End bp | 154904 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506095 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001190291 |
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| Protein GI | 146302975 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.557885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.116027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCAA GGATAGGAAG AGAAATAGAA CTCTCGCCCG TGGAGATGGG ATCTAGGCTC
GGGCGTAACG TAAAAATTAA CATGGCCAGC GGGTCACCCG ATCCGTCAAC TATTCCAGTT
GATGAGATAG GAAGAGCCTA CGAGGAAGTG CTGGCCGACC TGGGCCCAAG ATCACTTTTC
TACCCAGGTG CTGGAGGTCA GCAGGAGCTA ATTGAGGAGG TGAACAAATA TCTTCCTGCC
ATAGGCTTGA GAAGTAAGGA TCCGATAGTC ATAACCAGCG GTGCTCAACA CGCCATAGAG
TTGCTGTCGA AGTACTTCCT CGAGAACGGG ACAGTTGTGG TGGAGAACCC AACCTTCGTG
GAGACTTTTT CAGCCTTTAA GTTAAGGGCT TCGGTCACGA TACCCGTCAC TGTGGATGGA
AAGGGTATTT CCACAGATGA GCTGGAGCTC GTTACCAAGA TAGTTAAGCC AGATCTAGTC
TACGTGATAC CGGACTGTCA TAACCCTGCT GGAGTGAACT TGAATGAGGA AAGGAGGAAG
ATACTGGTTG AGTTGGCTGA GGAAAGGGAC TTCTATGTGA TAGAAGACGA CCCTTACAGA
CCCATAGCTG GGTGCGTTCC AGCTCCATTA AAAAATTACG ATCGTAGTGG CAGGGTCATA
CACGTCAGCA GTTTCAGTAA GATCTTGGCA CCGGGTCTAA GGATAGGTTT CGTGGTAGCC
CCTCCAGAAA TAGCGGAGAA GTTGAGCCTC ATGGAACAAC TGGACTTTTC CACTTCAACT
CTAAATCAGT ATGTCGTCTC GCGCCTTTTG AGATCTGGAT TCATTTTATC TAGAACGAAG
ATTCTTCCAG AGCACTACAG GAAGAAAATG AAAGTCCTTG TGGACTCCCT AACGGATGCA
GGGATATCAG AGTTTAATCA GCCCAGTTGC GGGTTCTTCC TTTTGCTTGA CCTTAAGAGG
GATGCCCATA GAGTTTTGGA GGAAGCGGTA AGGCAAGGCC TAGCTTTCGT TCCTGCTAAG
GACTTCTTCC TACGGGGCGG AGAGACAATG GCTAGGCTGA GTATCACAGT TCCCAATGAG
GAGCAGATCA AGGCCGGAGT TGAGATACTG AAGAGGGTTA TTCGAGGCTA G
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| Protein sequence | MVSRIGREIE LSPVEMGSRL GRNVKINMAS GSPDPSTIPV DEIGRAYEEV LADLGPRSLF
YPGAGGQQEL IEEVNKYLPA IGLRSKDPIV ITSGAQHAIE LLSKYFLENG TVVVENPTFV
ETFSAFKLRA SVTIPVTVDG KGISTDELEL VTKIVKPDLV YVIPDCHNPA GVNLNEERRK
ILVELAEERD FYVIEDDPYR PIAGCVPAPL KNYDRSGRVI HVSSFSKILA PGLRIGFVVA
PPEIAEKLSL MEQLDFSTST LNQYVVSRLL RSGFILSRTK ILPEHYRKKM KVLVDSLTDA
GISEFNQPSC GFFLLLDLKR DAHRVLEEAV RQGLAFVPAK DFFLRGGETM ARLSITVPNE
EQIKAGVEIL KRVIRG
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