| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0188 |
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| Symbol | |
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| ID | 5103932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 151834 |
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| End bp | 152664 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506093 |
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| Product | transposase, IS605 OrfB |
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| Protein accession | YP_001190289 |
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| Protein GI | 146302973 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000147679 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0541338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAC ATTTGGTTGA GGCCAAAATA ATTGATTACG GTAAGCTAAA AACTATACAC
AGCGACATAG TTTACTACGT GTCCTACTAT AAAACGTTAG AGAAATCAGG AGTAAAGACC
AAGCCCTCTC CCCCTCCCAG CCTGAAGGAC ATGAACGTAA TTTATACGAA GCCAAGGATA
GGCCCCCTGA AATTAATCGG AGAAGGACCA GTTTACAAGC TAGATAAGGT AGGGGCAATT
GTGAGTGTGG ATTTTCCAGG AACTCCGCTA TATGCCATAG TGGACTTTGA GGATAGCATT
AGGGTATATC TTGCGTATCC AGTGGAGGAC CCTATTGTGG GAATAGATCT AGGAATAAGA
CACCTGTTCA CAGTGGTTGC AGTTACCAAG AACGGAAAGA TATACAAATC AAAGTACATA
GGTAACGGTA GTATAATGGA GACCTTTACT AAATACATGA GCGAGACGCA GGGACTCTCC
TATGTCAGGG AGATAAGGGA AAAGGTCAGG ATATCTTTAA GGGAGTTGAT GGATTTCCTT
GTCGAGTTAA GCCCTAAGAT TGTCGCGCTG GAGGATTTGA GATTATATGA CGCGAAGATA
GGCAGAGGTC TCAAACTGAT CGAAGATGAA CTGGAGAGGG AATTGTTGGA GAAAGGGATA
AGATTCAGGA GATTGGATCC TAGAAACACC TCGAAGGTTT GTTCCCAGTG CGGGTACAAG
AAAGGTGAAG TTATGGGATC CCTGTTCGTG TGTCCAGCGT GCGGATATAA GGTGGACAGG
GACTTCAACG CTGCATATAA CCTCGCACTG AAGTGTTACT ATACCTGTTA A
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| Protein sequence | MKEHLVEAKI IDYGKLKTIH SDIVYYVSYY KTLEKSGVKT KPSPPPSLKD MNVIYTKPRI
GPLKLIGEGP VYKLDKVGAI VSVDFPGTPL YAIVDFEDSI RVYLAYPVED PIVGIDLGIR
HLFTVVAVTK NGKIYKSKYI GNGSIMETFT KYMSETQGLS YVREIREKVR ISLRELMDFL
VELSPKIVAL EDLRLYDAKI GRGLKLIEDE LERELLEKGI RFRRLDPRNT SKVCSQCGYK
KGEVMGSLFV CPACGYKVDR DFNAAYNLAL KCYYTC
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