| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0186 |
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| Symbol | |
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| ID | 5103930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 150302 |
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| End bp | 150988 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506091 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001190287 |
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| Protein GI | 146302971 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000106094 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0583426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAATCA CATTTCTAGG TACAGGGGCA GGAAGTACCG CAGGATCGAG AAGGTTTAAG
GCAGGAATAC TAGTTGAGGG GAAGGAAGGG AAGATTGTGT TGGATTTTGG GTCAGGTATT
AACATGAGAT TGGAGGACAT GCGCGTAGTT CCTGACGCCG TCTTCATAAC CCATTTGCAC
ATTGACCATT TCTCTGGAAT ATTTGATCAT CTCGTGAGAA GACAAATCGA TAGGGTACCA
GAACTCAAGG TATTCTCTCC GCCTGGATTT TCAGAGGTAC TTAGAGTCTA CCAAAAGACT
AATAACATTT CAGCTCAGGT TATGGAAGAC CACCTCCCCT CAGGAAAAAT AGGTGATCTA
GAGGTCTATT CCTTGGAAGC CTGTCATAAG ATATACGCCG TGTCCTATAT CATCACAGAC
GGAAAAAGGA GAGTACTTTA CTCAGGCGAT ACCCTGGAGC CCTGTGATAC AGTGCTAAGA
GAGATATCAG GGGTTGACCT GGTTATCCAT GAAGCCAGTT GCTTAGAGAA CTGTAAGGAA
TGGGGACATA CCTCTGTTAA GGAGGCGATT AACCTGTTTA GGAACCCTGT CCTAACTCAC
GTCCCAGCAC AGCTCGAGGG TGAGGTTGAG AATTCCGTGA AGGGCAAGGC CTTACTCGCT
AAGGACGGGT TGAGTTTGGA TGTGTAG
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| Protein sequence | MKITFLGTGA GSTAGSRRFK AGILVEGKEG KIVLDFGSGI NMRLEDMRVV PDAVFITHLH
IDHFSGIFDH LVRRQIDRVP ELKVFSPPGF SEVLRVYQKT NNISAQVMED HLPSGKIGDL
EVYSLEACHK IYAVSYIITD GKRRVLYSGD TLEPCDTVLR EISGVDLVIH EASCLENCKE
WGHTSVKEAI NLFRNPVLTH VPAQLEGEVE NSVKGKALLA KDGLSLDV
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