| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0084 |
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| Symbol | |
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| ID | 5104662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 73404 |
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| End bp | 75614 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640505983 |
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| Product | elongation factor EF-2 |
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| Protein accession | YP_001190185 |
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| Protein GI | 146302869 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0480] Translation elongation factors (GTPases) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G
[TIGR00490] translation elongation factor aEF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000102607 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCCCAAAT ATAAGACATC AGAACAAGTT TTGAGCCTAA TGAAGGATAG GACAAGGGTA
AGGAATATTG GTATCATTGC ACACGTTGAT CACGGTAAGA CAACCACCAG CGACCAACTA
TTGGCTGCCT CAGGTATAAT TTCACCTAAG GTAGCTGGAG AGGCATTAGC CCTGGACTAT
CTATCCGTAG AACAACAAAG GGGTATAACT GTTAAGGCAG CTAACGTAAG CTTGTACCAC
GAAGTTGAGG GTAAAGGTTA CGTCATTAAC CTGATTGATA CTCCTGGACA CGTTGATTTC
AGCGGAAGGG TAACTAGAAG CCTCAGGGTG TTAGACGGAT CCATCGTAGT GGTAGATTCT
GTGGAAGGAG TAATGACACA AACTGAGACT GTGTTGAGGC AAAGCCTAGA GGAAAGGGTA
AGGCCAATTC TGTTCGTTAA TAAGGTGGAC AGGCTGGTTA AGGAGTTGAA GTTAGGTCCT
CAAGAAATGA TGCAGAAGTT AATGGATATC ATTAAGGAAG TAAACAATCT CATTAACATA
TATGCTGAGC CTGAACTAAA GGAGAAATGG GCCATTAATC CAACCTTGGG CAATGTGGTG
TTTGGTTCGG CAAAGGACAG GTGGGGCTTT AGTATACCAA TGGCTCAGAA AAAGGGCATC
AACATGAAAC ATGTGATTGA TGCCTATTCA ACTACCGACA AGACAAAGAT TAATGAATTA
GCGTCTCAAG TACCCATAAA CGAGGCACTT CTGGACGCAG TGATTAAGTT TGTACCAAAT
CCTGTGGACG CTCAGAAGTA TAGAATTCCC AAGATATGGA AAGGCGACCT GGATAATGAG
CTGGCAAAGT CCATGCTTAA CGCGGATCCA AATGGTCCCG TCGTGATGAT GATCACAGAC
ATGAAGGTTG ATCCACATGC AGGTCTGGTG GCGACAGGTA GGGTATTTTC CGGTACCATT
AGGCCCGGTA GTGAGGTTTG GTTAGTCAAT GCCAAGGCAC CTCAGAAGGT CCTACAGGTC
AGCATTTACA TGGGTCAGTT TAGGGAGCTA GCAGATGAAA TACCAGCAGG AAATATTGCT
GCAGTGCTGG GCTTGGAAAG GGCCAGATCC GGTGAGACTC TCATAGACAT TAGATATAAA
GATCTTCAGG GAAGCTTTGA GAAGCTTCAT TACGTCTCAG AGCCCGTGGT AACCATAGCA
GTGGAGCCCA AGAATCCAAA GGACTTAACA AAAATGATTG ATGCGCTAAG GAAGCTAAGT
ATTGAGGATC CTAACCTAGT GGTCAAGATT AATGAGGAGA CCGGAGAGTA TCTCCTCTCT
GGAATGGGAT TCCTACACGT TGAGGTCTCG TTACAGTTGC TAAAGGATAA TTATGGCGTT
GATGTAGTTA CTACTCCACC AATCGTGGTG TATAGGGAGA GTGTAAGGAA TAAGAGTCAG
GTGTTTGAGG GTAAATCTCC CAACAAGCAT AACAAGTTCT ACATCAGTGT TGAACCGCTT
AATGATAAGA CGATTGAACT GATCTCTAAC GGTACCATCA AGGAGGACAT GGATTCTAAG
GAGATGGCCA AGATTCTCAG GGATCAAGCA GACTGGGATT ACGACGAGGC TAAGAAAATA
ATCGCTATTG ATGAAAACGT TAATGTACTC ATAGATGCCA CGAGCGGTGT CCAGCATTTA
AGGGAGATAA TGGATACAAT GCTCCAAGGT TATAGGTTGG CAATGAGAGA AGGGCCTTTA
GCTCATGAAC CTATCAGGGG AGTAAAGGTT ATACTTCACG ACGCTACCAT ACATGAAGAT
CCTGCACATA GGGGACCTGC CCAAATCTAT CCGGCAGTGA GGAATGCCAT ATTTGCTGCA
ATGCTCATGT CTAAGCCAAC ACTCCTAGAG CCACTTCAGA AGCTTGATAT AAGGGTTCCG
ATGGAATTTG TGGGTAACGT AACAGCGGTT CTAAGCAGAA AGAGGGGCAA AGTGCTTAAT
ATGACTCAAT CTGGAAGCGT CGCTAGGATA CTTGCAGAGA TCCCTGTGTC AGAGTCCTAC
GAGCTAGCCA GTGATCTAAG AGGCTCCACC GGCGGTAGAG CGTTCTGGGG AACCGAGTTC
AGTAAATGGG CTCCAGTTCC AGATAGCATC CTTACTGATG TGATTCTGAA GATTAGAGAA
AGAAAGGGTC TCCCCAAGGA ACTGCCCAAG GTTGAGGACT TCCTGTCGTG A
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| Protein sequence | MPKYKTSEQV LSLMKDRTRV RNIGIIAHVD HGKTTTSDQL LAASGIISPK VAGEALALDY
LSVEQQRGIT VKAANVSLYH EVEGKGYVIN LIDTPGHVDF SGRVTRSLRV LDGSIVVVDS
VEGVMTQTET VLRQSLEERV RPILFVNKVD RLVKELKLGP QEMMQKLMDI IKEVNNLINI
YAEPELKEKW AINPTLGNVV FGSAKDRWGF SIPMAQKKGI NMKHVIDAYS TTDKTKINEL
ASQVPINEAL LDAVIKFVPN PVDAQKYRIP KIWKGDLDNE LAKSMLNADP NGPVVMMITD
MKVDPHAGLV ATGRVFSGTI RPGSEVWLVN AKAPQKVLQV SIYMGQFREL ADEIPAGNIA
AVLGLERARS GETLIDIRYK DLQGSFEKLH YVSEPVVTIA VEPKNPKDLT KMIDALRKLS
IEDPNLVVKI NEETGEYLLS GMGFLHVEVS LQLLKDNYGV DVVTTPPIVV YRESVRNKSQ
VFEGKSPNKH NKFYISVEPL NDKTIELISN GTIKEDMDSK EMAKILRDQA DWDYDEAKKI
IAIDENVNVL IDATSGVQHL REIMDTMLQG YRLAMREGPL AHEPIRGVKV ILHDATIHED
PAHRGPAQIY PAVRNAIFAA MLMSKPTLLE PLQKLDIRVP MEFVGNVTAV LSRKRGKVLN
MTQSGSVARI LAEIPVSESY ELASDLRGST GGRAFWGTEF SKWAPVPDSI LTDVILKIRE
RKGLPKELPK VEDFLS
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