Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0074 |
Symbol | |
ID | 5104652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 67481 |
End bp | 68203 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640505973 |
Product | proteasome subunit alpha |
Protein accession | YP_001190175 |
Protein GI | 146302859 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000128954 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0113396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTG GACCAGCCGC AATGGGTTAT GATAGGGCAA TAACAATATT TTCGCCCGAC GGCTCCTTAT ACCAAGTAGA TTACGCCTTT GAGGCAGTGA AGAAAGGATG GACTACTTTG GGCGTTAAAA CCAAGAACGC AGTGGTCATC CTAGGAGAGA AGAAGAAAGC TTCCCAGCTA CTTGATGTGG ACAGCATAGA GAAGGTCTTC CTATTGGATG ATCATGTTGG ATGTAGTTTT GCAGGTCTAG CGTCAGATGG AAGGATACTT ATCGACTACG CCAGGAATTC CTCTCTTCAA CACAGGCTAG TTTACGACGA ACCCATCAGT ATAGATTACC TTACCAAATT AATATCAGAC GTGAAGCAGA TGTATACTCA GCACGGTGGA GTTAGACCGT TCGGCGTTGC ACTAATAGTG GGCGGAGTAG ACAGGGGCGT TACTAAGTTA TTTATGACTG AGCCCAGTGG GCAGTTCATG CCCTATCAGG CAGTGGCCAT AGGACAGGGA GGGTATAATG CAACAGATTA TCTGGAGAAG AACTACAAGG AAGATTTAAG CGTAGAGGAG ACCATCCTGT TAGCACTGAA TGCCTTGAAG GTAACTCTAA AGCCTGGAGA GAAACTGGGC CCTGGAAACG TCGAAATAGG ATTCGCGACC AAGGAAGGAC AGTTCAGGAA AATGACTCTC GAGGAAAGGG CGAACTATCT GCAGAAAATT TAA
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Protein sequence | MAFGPAAMGY DRAITIFSPD GSLYQVDYAF EAVKKGWTTL GVKTKNAVVI LGEKKKASQL LDVDSIEKVF LLDDHVGCSF AGLASDGRIL IDYARNSSLQ HRLVYDEPIS IDYLTKLISD VKQMYTQHGG VRPFGVALIV GGVDRGVTKL FMTEPSGQFM PYQAVAIGQG GYNATDYLEK NYKEDLSVEE TILLALNALK VTLKPGEKLG PGNVEIGFAT KEGQFRKMTL EERANYLQKI
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