| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0074 |
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| Symbol | |
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| ID | 5104652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 67481 |
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| End bp | 68203 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640505973 |
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| Product | proteasome subunit alpha |
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| Protein accession | YP_001190175 |
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| Protein GI | 146302859 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000128954 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0113396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTTG GACCAGCCGC AATGGGTTAT GATAGGGCAA TAACAATATT TTCGCCCGAC
GGCTCCTTAT ACCAAGTAGA TTACGCCTTT GAGGCAGTGA AGAAAGGATG GACTACTTTG
GGCGTTAAAA CCAAGAACGC AGTGGTCATC CTAGGAGAGA AGAAGAAAGC TTCCCAGCTA
CTTGATGTGG ACAGCATAGA GAAGGTCTTC CTATTGGATG ATCATGTTGG ATGTAGTTTT
GCAGGTCTAG CGTCAGATGG AAGGATACTT ATCGACTACG CCAGGAATTC CTCTCTTCAA
CACAGGCTAG TTTACGACGA ACCCATCAGT ATAGATTACC TTACCAAATT AATATCAGAC
GTGAAGCAGA TGTATACTCA GCACGGTGGA GTTAGACCGT TCGGCGTTGC ACTAATAGTG
GGCGGAGTAG ACAGGGGCGT TACTAAGTTA TTTATGACTG AGCCCAGTGG GCAGTTCATG
CCCTATCAGG CAGTGGCCAT AGGACAGGGA GGGTATAATG CAACAGATTA TCTGGAGAAG
AACTACAAGG AAGATTTAAG CGTAGAGGAG ACCATCCTGT TAGCACTGAA TGCCTTGAAG
GTAACTCTAA AGCCTGGAGA GAAACTGGGC CCTGGAAACG TCGAAATAGG ATTCGCGACC
AAGGAAGGAC AGTTCAGGAA AATGACTCTC GAGGAAAGGG CGAACTATCT GCAGAAAATT
TAA
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| Protein sequence | MAFGPAAMGY DRAITIFSPD GSLYQVDYAF EAVKKGWTTL GVKTKNAVVI LGEKKKASQL
LDVDSIEKVF LLDDHVGCSF AGLASDGRIL IDYARNSSLQ HRLVYDEPIS IDYLTKLISD
VKQMYTQHGG VRPFGVALIV GGVDRGVTKL FMTEPSGQFM PYQAVAIGQG GYNATDYLEK
NYKEDLSVEE TILLALNALK VTLKPGEKLG PGNVEIGFAT KEGQFRKMTL EERANYLQKI
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