Gene Pmen_4585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4585 
Symbol 
ID5106896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5030671 
End bp5031678 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID640505856 
Productprotoporphyrin IX magnesium-chelatase 
Protein accessionYP_001190064 
Protein GI146309599 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGA CCGAACATCA CTTCCCCCTC GCCGCCGTGG TCGGCGCCGA TTCGCTGAAG 
CTGGCGCTGT GCCTGGCGGC CATCGACCCG GCCATCGGCG GCGTGCTGAT CGAGGGCCCG
CGCGGTATGG CCAAGTCCAC ACTGGCCCGT GGCCTGGCCG ACCTGCTGGA GGGCGGGCGC
TTCGTCACCC TGCCGCTGGG CGCCAGCGAG GAGCGCATCG TCGGCACCCT GGATCTGGAC
GCAGCGCTGG GCGAAGGCCG CGCGCAGTTT TCCCCCGGCC TGCTGGCCCG CGCCGATGGC
GGCGTGCTCT ATGTCGATGA GGTAAACCTG CTGCCGGATC ATCTGGTCGA TCTGCTGCTC
GATGCTGCCG CCAGCGGGGT CAACCATGTC GAGCGTGACG GCATCTCCCA TCGGCATGCC
GCGCGCTTCG TGCTGATCGG CACCATGAAC GCCGAGGAAG GCGAGTTGCG CCCGCAACTG
CTCGACCGCT TCGGCCTGAA TCTGGCGCTG GATGGCCAGC CGCAGCCATC CGAGCGTGCC
GAGATCGTGC GTCGTCGCCT GGCCTTCGAT GCTGACCCCG TCGCCTTCCT GCAACGTTGG
CAGGTCGAGC AGGCTGCCCT TGCTGCCCGT TGTCGGAATG CCCGCCAGCG CCTGGCGGAT
ATCCCGCTGG ATGACGCCGC CCTGGGCGAG ATCAGCCAGC GCTGCTTCGC TGCCGGTGTC
GACGGCCTGC GCGCCGATCT GGTCTGGCTG CGTGCCGCTC GTGCCCATAC GGCCTGGCGT
GGCGCGGCGG GCATCGAGCC TGTGGATATC GAGGCGGTGG AGGACTTCGT TCTGCGCCAT
CGCCGTCGCC AGCAACAACC GCCGGCTGCC ACACCGCCCG AGCAGAGCCA GGCGCCGCAG
CAGGCGCAGG AACAGAGCCA GGGCGAGGGC CAGTGGGGCG AGCTGCCGGC GCAGCCGCAG
GCCATGGGCG AACGGCGCGT GCCGCCGCGT TGGCCAAAAA AGTCCTGA
 
Protein sequence
MSMTEHHFPL AAVVGADSLK LALCLAAIDP AIGGVLIEGP RGMAKSTLAR GLADLLEGGR 
FVTLPLGASE ERIVGTLDLD AALGEGRAQF SPGLLARADG GVLYVDEVNL LPDHLVDLLL
DAAASGVNHV ERDGISHRHA ARFVLIGTMN AEEGELRPQL LDRFGLNLAL DGQPQPSERA
EIVRRRLAFD ADPVAFLQRW QVEQAALAAR CRNARQRLAD IPLDDAALGE ISQRCFAAGV
DGLRADLVWL RAARAHTAWR GAAGIEPVDI EAVEDFVLRH RRRQQQPPAA TPPEQSQAPQ
QAQEQSQGEG QWGELPAQPQ AMGERRVPPR WPKKS