Gene Pmen_4584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4584 
Symbol 
ID5106895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5029940 
End bp5030581 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID640505855 
ProductMg-chelatase subunit ChlD-like protein 
Protein accessionYP_001190063 
Protein GI146309598 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGTC GTATCGACTG GGCGGCCACT CTGCGCCAGG GCCGGCCGCA ATGCCGCGAA 
CAGTTGGTGC TGCGCCCGCG CAGCCAGCAG GCTGAGGAAC TCTGGCTGGT GCTGGTCGAT
GCCTCTGCCT CGATGCGCCG GCATAGTGCT CTGAGCCTGG CCAAGGGCGT GCTCGCCGAG
CTGTTCGACA ACGCCTATCG CCAGCGCGCG CGCCTGGCCT TGCTGCAGGC CGGCGGCCGC
GAGGCACAAT GGTTATGGCA AGGGCGCAAG GCCAGCGCCG AGCTGCACCG TTGGCTGCAC
GAGTTGGGTG CGGGAGGCGG CACGCCGCTG CTCGATGCAC TGAATCAGGC GGGTGACTGG
CTGCTGCGTC GCCAGCGGGC GAAACCGAGC GAACGCCAGC GCCTGCTGAT CCTCACCGAC
GGTCGCCTGC GTGACCTGCC CAACCTGGCG CCGCTGCCAT GCCCAACCCT GCTGCTCGAC
ACCGAGCGCG CGCCCATCCG CCTGGGCCGT GCGCAGCAGT TGGCACAGGC GCTGCAGGCC
GAGTACCAAC ATATTGATGA TTTACTGCCT GTAGGAGCCG AGGACGCTGA TCGCCGGCAA
GCCGGCTCCT ACGGGTTGTC CGTTACCTGG AGAACCCCAT GA
 
Protein sequence
MAGRIDWAAT LRQGRPQCRE QLVLRPRSQQ AEELWLVLVD ASASMRRHSA LSLAKGVLAE 
LFDNAYRQRA RLALLQAGGR EAQWLWQGRK ASAELHRWLH ELGAGGGTPL LDALNQAGDW
LLRRQRAKPS ERQRLLILTD GRLRDLPNLA PLPCPTLLLD TERAPIRLGR AQQLAQALQA
EYQHIDDLLP VGAEDADRRQ AGSYGLSVTW RTP