| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4575 |
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| Symbol | |
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| ID | 5106886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5020694 |
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| End bp | 5021674 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640505846 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001190054 |
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| Protein GI | 146309589 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC GCCCCGATCT GCGTTTTCTT CTGCTGCCCC TGCCGGAGTT CGCCCTGCTG
CCGTTCGGCG GCTTTCTTGA CAAGCTGCGC TTCAGCGCCG ATGACGAGGA CTACAGTCGC
CAGCGTTACT GCACCTGGAC GATTCTCGGC CTGCAACCAG GGCATGTGCT GTCCAGCAGC
GGTGCTGCGC TGCGTATCGA GGCTACACCC GAGCAACTCG ATCTGGCTGA CTTCGACTAT
CTGGTGCTGT TCGGCGGGCG CAACGCGCAG GCCACCGCCG CGCTGGCGCC GACCTATCAG
CAGCTGCTGC GTCGCGCAGC TCGCGCTGGG GTGAAGCTGG TGGCGATCGA CAATGCCAGC
TTCCTGCTCG CCGCCTGCGG CCTGCTCGAC GGTCATCGGG TGGCGGTGCA CTGGCGCCAT
GAAGCGGAAT TCCGCGCCAG CTTTCCGCAG CTGCGACTGG CTCGCGAGCG TCTGTATTGC
CTTGATGGTG CGCGGATTTC CTGCGCCGGC GGCACGGCGG CCATCGACCT GGCGGTGGAA
CTGCTGGCTC AGGGCAGCGG CCGGGCACGG GCGCTCAAGG GCTTGGCCGA TATGCTGGTG
GACGAAACGC GCAGCGGCCA GCACGCGCTG CGCTCGTTGC ACACCACACC GAGCGGCGAG
CGCCATGTCG ACCGCGCCAT CGCCCTGATG CGCCATGGTC TGGCCAGCGC CGATGGCATC
GAGCAGTTGG CGGCCAGCGT TGGCATCAGC CGGCGTCAGC TCGATCGCCT GTTCCACGCC
AGCCAGGGCA TGAGTGCGCG CGAATACTGG AACGAGCTGC GCCTGCAGCA CGTGCGCTGG
CGCCTGCTCA ACTCCAGCCA CAGCCTGGCG CAACTCGCCG ACGAGATCGG CGCCAGCGAT
GCCAGTCATC TGGGCAAGCT GTTCCGCCAG CGCTTTGGCT TGGCGCCCGG CACCTTCCGT
CGTCAGGGTG GCGCGTTGTA G
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| Protein sequence | MTERPDLRFL LLPLPEFALL PFGGFLDKLR FSADDEDYSR QRYCTWTILG LQPGHVLSSS
GAALRIEATP EQLDLADFDY LVLFGGRNAQ ATAALAPTYQ QLLRRAARAG VKLVAIDNAS
FLLAACGLLD GHRVAVHWRH EAEFRASFPQ LRLARERLYC LDGARISCAG GTAAIDLAVE
LLAQGSGRAR ALKGLADMLV DETRSGQHAL RSLHTTPSGE RHVDRAIALM RHGLASADGI
EQLAASVGIS RRQLDRLFHA SQGMSAREYW NELRLQHVRW RLLNSSHSLA QLADEIGASD
ASHLGKLFRQ RFGLAPGTFR RQGGAL
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