| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4542 |
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| Symbol | |
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| ID | 5107000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4976091 |
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| End bp | 4979495 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640505813 |
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| Product | serralysin |
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| Protein accession | YP_001190021 |
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| Protein GI | 146309556 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.303365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGAACT ACCAACAAAT CACGCCGTTT TCCTATATAC CGCTAAGTAT TTCTGCGACG
GTTAATACGT TGCTTTATGG CACCAAATGG GGTGGAGGAC TTGGTTTCCC CGTTACGCTG
ACATACAGCT TCGCTAATCC TGGCGTATCA CAATATTCGA CCGATTACGA TGATTTTGTC
GAGTACTGGA CGGGAAGCAA CTCCAGTAAT TTTATATATA GCCTGAGCTC CAACCAGGAA
AGCGCGGTTC GCAGTGCATT GGCCCAATGG AGCTCGGTTG CCAATCTCTC CTTTACCGAG
GTGAGCGATA CGGCTGGCGG TACGGTAGGT GATCTGCGCT TCGGCGGTTA TAAGCTTATC
GATTGGGACA CTGCGGCATT TGCTTTTCTG CCTGGTGCAA GTCCACTAGC GGGCGATGTC
TGGATCGGGC CTGTGACCAA TGAGGTCAAT CCTTCTGGCG GTAGTTACGA TTACCTGACT
TTTTTACATG AGATCGGTCA TGCGCTGGGT CTCAAGCATC CATTCGAGGC GTCAGGAAGC
AGTAATTACG TATTGCGCGG CGCTTATGAT GACGTGCGTT ATACGGTTAT GAGCTACAAC
GATACCTATG ACTTTCTACC AACCGGTCCG ATGCTCTACG ATATCGCAGC CATGCAGTAT
ATTTATGGCA GTAACGACAC ATGGCAAACG GGAGACAATG TTTATAGCTG GGATGCCAAT
GCGCGTATCT TTGAAACTAT CTGGGATGCT GGCGGTAATG ACACGATTGA TGCCAGCAAT
CAGAGTGCAG GTGTAGTAAT TAATCTAAAT AGTGGTGAAT TCAGCTCTAT CGGTCAGAGT
ATATATAACT ATGCTACCGG TGCAGGGCGT AATAATTTCC TAACCATCGC CTATGGCTCT
GTTATCGAAA ATGCTATCGG TAGTGATTAC AAGGATACCT TGATCGGTAA TAGCGCCGAT
AACGTGCTCG ATGGCGGTAA GGGTGAAGAT GTTTTGCGCG GGGGAGCTGG TAACGATACT
TATTACGTTG ATCTTCCAAC CGGCTCGGAC TTTTATGACA GGGTGACCGA ATACGCTGGT
GAGGGTTATG ACAAGGTCGT TTTACGTGGT ACCAGCACAG GCTTTTTCGG CCGTTCGTTT
GCCTTGGCCA ACAATGTCGA AGAGGTGGAT GCCAGCCAGA CGGGTGCTGT TGCGTTGACG
TTACTTGGCA ACAACTCGGC GAACCGCATT ATCGGCAACG CGGGAAACAA TTTACTCAAT
GGTGGTGCAG GTGCCGATAC CATGATTGGC GGTGCCGGCA ACGACACCTA TGTGGTCGAT
CACCTGGGTG ATGAGGTAAT CGAACAGGTC GGAGAAGGTA TTGATTTGGT GCAGGTTGCC
ATTGCGACTG CAGGTGGTAC CTACACCCTG GGCGATCATG TCGAGAACGC CACCCTGACC
AACTCGGTCT CGTTCAATCT GGTAGGTAAT ACGCTGTCCA ACACTTTGGT CGGCAATGCT
GCAAACAATC TACTCGATGG TGGTGCAGGC GCTGATGTGA TGAACGGTGG CGCTGGGAAC
GATACCTATG TTGTCGACGA TATTGGTGAT CAAATCATCG ATAGCGCAGG TATCGATACG
GTTCTTGCCA GTATTTCCTA TACCCTCGGC AATGACCTGG AGAACCTGAG CCTGCTGGGC
AGTGAGGCTC TCAACGGCAC CGGCAATGGA TTGGCTAACG TCATCACCGG TAACGATGGC
AGCAACGTGC TCGATGGTGG TGGTGGCGTG GACACGCTGC GGGGTGGCAA GGGTGACGAC
ACCTATATCG TCGACCTGAC GGCGAGGAAT ACGCTCGAAG ACAGCGTCCT TGAGAACCTC
TACGAGGGTA ACGATACGAT CCAGTTGCGC GGAGGCAATG TGGCGTTGGC TACAGTGACA
GCCATCGCCC TGGCCAATAA CGTCGAGAAC CTCGACGCCA GCGCGACCGG AACAACTCGC
CTGAATCTGA CCGGTAATGT GCTGAATAAC ATCCTGATCG GCAATGCGGC AGACAACCTG
CTGAATGGCG GCGCTGGTGC CGATAGATTG ATTGGTGGCG ATGGTAACGA TACCTACGTG
GTCGACAACT TGGGTGACGA AGTGATCGAG CAGGCCGGGG AGGGCACTGA TCTGGTACAG
GTTGCCATCG CCACGGCTGG CGGCACCTAC ACCTTGGGTG AGCATGTCGA GAACGCCACG
CTTACCAATA AAGTGGCATT CAACCTGACC GGCAATGCGC TGAGCAATAC TCTGGTCGGC
AATGCTGCGA ACAACGTACT TGATGGTGGC CTGGGTGCTG ACGTGATGAA CGGTGGCGCG
GGTAATGACA CCTACATTGT CGATGATGTG GGCGATACGA TCATTGACAG CGCCGGTATC
GACACCGTGC GAGCGAGCAT CGCCTACACC CTGGGCAAGG GACTGGAAAA CCTTGTGCTC
ACGGGTAGCC ATGCCGTTTC TGGTACGGGC AATGCGCTGG CGAACATCCT GGATGGTTCG
CAGAACAACG CAGCCAACGA GCTACGGGGT CTAGGTGGCA ACGATACCTA CATCGTCGGT
GCCGGTGACA CGGTTATCGA AGAGGCCAAT GGCGGTATCG ATCTGGTGCA GGCCTACGTG
AGTTACACCT TGGGCGATCA TGTTGAGAAC CTGAGCCTGC TGGGCAGTGA GGCTCTCAAC
GGCACCGGCA ATGGATTGGC TAACGTCCTC ACCGGTAACG ATGGCAGTAA CGTGCTCGAT
GGTGGTGGTG GCGTGGACAC GCTGCGGGGT GGCAAGGGTG ACGACACCTA TATCGTCGAC
CTAATGGCCA ATAACGCGCT TGAGGATCGC GTTGTCGAAA ACGCCAACGA AGGCATCGAC
ACAATCGTCT TGCGCGGAGG TTCGGCACTG CCGAAAGCCG CTACCATCGT TTTGGCTAAC
AACGTCGAGA ATCTAGATGC TAGTGGAACG GGCAGCATCG CTCTCAATCT CACGGGCAAT
GCCGCGAACA ACCTGTTGAT CGGTAATCAG GGCAACAACA CTCTAAACGG TGGCGATGGT
AACGACACCC TCATTGGCAT GGGGGGCTTC GACACGCTGA CCGGTGGCCG CGGTGCCGAT
ACCTTCCGCT TCGCCCTAAC TTGGCTAGGT ATGAATAGCG GTCCAGATGC GGTGATCACG
GACTTTCGTC GTCTGGATGG CGACAAGATC CAGTTGCAAG GCGAGGATGC GGAGCGCTTC
AGCTTTGTTG GACGCACGTT CGACACAGGC GCCACGGGTA GTCATCAATT GCGTTTTGAC
GCGGGTACGC TCTACGGCTC CGTGGACTCT GGTATGAGTA ATGCTTTCGA AATTCGCTTG
CTGGGTGTGA GCGAGTTGCG CCAAGACGAC TTCCTTTTTG GTTGA
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| Protein sequence | MTNYQQITPF SYIPLSISAT VNTLLYGTKW GGGLGFPVTL TYSFANPGVS QYSTDYDDFV
EYWTGSNSSN FIYSLSSNQE SAVRSALAQW SSVANLSFTE VSDTAGGTVG DLRFGGYKLI
DWDTAAFAFL PGASPLAGDV WIGPVTNEVN PSGGSYDYLT FLHEIGHALG LKHPFEASGS
SNYVLRGAYD DVRYTVMSYN DTYDFLPTGP MLYDIAAMQY IYGSNDTWQT GDNVYSWDAN
ARIFETIWDA GGNDTIDASN QSAGVVINLN SGEFSSIGQS IYNYATGAGR NNFLTIAYGS
VIENAIGSDY KDTLIGNSAD NVLDGGKGED VLRGGAGNDT YYVDLPTGSD FYDRVTEYAG
EGYDKVVLRG TSTGFFGRSF ALANNVEEVD ASQTGAVALT LLGNNSANRI IGNAGNNLLN
GGAGADTMIG GAGNDTYVVD HLGDEVIEQV GEGIDLVQVA IATAGGTYTL GDHVENATLT
NSVSFNLVGN TLSNTLVGNA ANNLLDGGAG ADVMNGGAGN DTYVVDDIGD QIIDSAGIDT
VLASISYTLG NDLENLSLLG SEALNGTGNG LANVITGNDG SNVLDGGGGV DTLRGGKGDD
TYIVDLTARN TLEDSVLENL YEGNDTIQLR GGNVALATVT AIALANNVEN LDASATGTTR
LNLTGNVLNN ILIGNAADNL LNGGAGADRL IGGDGNDTYV VDNLGDEVIE QAGEGTDLVQ
VAIATAGGTY TLGEHVENAT LTNKVAFNLT GNALSNTLVG NAANNVLDGG LGADVMNGGA
GNDTYIVDDV GDTIIDSAGI DTVRASIAYT LGKGLENLVL TGSHAVSGTG NALANILDGS
QNNAANELRG LGGNDTYIVG AGDTVIEEAN GGIDLVQAYV SYTLGDHVEN LSLLGSEALN
GTGNGLANVL TGNDGSNVLD GGGGVDTLRG GKGDDTYIVD LMANNALEDR VVENANEGID
TIVLRGGSAL PKAATIVLAN NVENLDASGT GSIALNLTGN AANNLLIGNQ GNNTLNGGDG
NDTLIGMGGF DTLTGGRGAD TFRFALTWLG MNSGPDAVIT DFRRLDGDKI QLQGEDAERF
SFVGRTFDTG ATGSHQLRFD AGTLYGSVDS GMSNAFEIRL LGVSELRQDD FLFG
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